[pkgsrc/trunk]: pkgsrc/math/gsl Update to version 1.4.

[jtb <jtb%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/d4c5e0ba3947
branches:  trunk
changeset: 460481:d4c5e0ba3947
user:      jtb <jtb%pkgsrc.org@localhost>
date:      Sat Aug 30 21:50:59 2003 +0000

description:
Update to version 1.4.

* What is new in gsl-1.4:

** Added cumulative distribution functions and their inverses for the
continuous random distributions including: gaussian, lognormal, gamma,
beta, cauchy, laplace, chisq, exponential, gumbel, weibull,
F-distribution, t-distribution, logistic, pareto and rayleigh.

** Added faster binomial random variates using the TPE rejection
algorithm, in the function gsl_randist_binomial_tpe.

** Added new functions gsl_rng_fwrite and gsl_rnd_fread for storing
the state of random number generators in a file.

** Added a new function gsl_combination_memcpy()

** Corrected values of electrical constants in CGS units.  To take
account of different electrical systems of units the values are now
prefixed by GSL_CONST_MKSA (for the SI Metre, Kilogram, Second, Ampere
system) or GSL_CONST_CGSM (for the Centimetre, Gram, Second, Magnetic
system with the Gauss as the fundamental unit of magnetic field
strength).  The previous GSL_CONST_MKS and GSL_CONST_CGS prefixes have
been removed, as have the permeability and permittivity constants in
the CGS system since this uses different defining equations.

** Fixed bugs in the random number generators gsl_rng_fishman18,
gsl_rng_fishman2x, and gsl_rng_knuthran2 which caused them to return
incorrect results.  Minor corrections were made to the parameters in
the other Knuth generators borosh13, coveyou, fishman20, lecuyer21,
and waterman14.

** Fixed a missing transpose bug in the gsl_linalg_QR_QRsolve
and gsl_linalg_QRPT_QRsolve routines which were computing the
solution to Q^T R x = b instead of Q R x = b.

** Fixed gsl_sf_gammainv to return zero instead of a domain
error for arguments corresponding to singularities in gamma.

** Fixed a bug in the simplex minimization algorithm which
caused it to fail to find the second highest point correctly
when searching the set of simplex points.

** Fixed a bug in the conjugate gradient minimizers conjugate_pr,
conjugate_fr and vector_bgfs which caused the search
directions to be updated incorrectly.

** Fixed a bug in gsl_sf_psi_1_int(1) which caused it to
return the incorrect sign for psi(1,1).

** Fixed the simulated annealing routine gsl_siman_solve to use the
parameter iters_fixed_T for the number of iterations at fixed
temperature instead of n_tries.

** Fixed a bug in gsl_combination_valid which caused it to return the
incorrect status.

** Fixed a bug in gsl_permutation_canonical_to_linear which caused the
output to always be zero, and the input permutation to be incorrectly
replaced by the output.

** Fixed a bug is gsl_ran_discrete which could cause uninitialised
data to be returned for some distributions.

** Fixed the dependencies for gsl_chebyshev.h to include gsl_math.h.

** Fixed a bug in gsl_complex_arccsc_real which caused it to return
the incorrect sign for the imaginary part when -1<x<0.

** Fixed a bug in the QAWC Cauchy integration routine which could
allow the singularity to fall on an interval boundary, leading to
division by zero.

** Improved gsl_sf_gamma_inc_P(a,x) to avoid a domain error for x<<a
when a>10.

** Improved the accuracy of gsl_sf_coupling_3j for large arguments.

** Improved the performance of gsl_sf_choose(m,n) by separating the
calculations for small and large arguments.

** On platforms without IEEE comparisons gsl_{isnan,isinf,finite} will
fall back to the system versions of isnan, isinf and finite if
available.

** gsl_linalg_householder_hv now uses BLAS routines internally

** The script configure.in is now compatible with autoconf-2.50 and
later.

** Reduced the memory usage of the multifit algorithms from MxM to MxN
for large M by performing the QR decomposition of the Jacobian
in-place.

** IEEE modes now use the C99 fenv.h functions when platform spectific
functions are not available.

diffstat:

 math/gsl/Makefile         |   4 ++--
 math/gsl/PLIST            |  31 +++++++------------------------
 math/gsl/buildlink2.mk    |   4 ++--
 math/gsl/distinfo         |   8 ++++----
 math/gsl/patches/patch-aa |  29 ++++-------------------------
 5 files changed, 19 insertions(+), 57 deletions(-)

diffs (143 lines):

diff -r 2891a3633444 -r d4c5e0ba3947 math/gsl/Makefile
--- a/math/gsl/Makefile Sat Aug 30 21:35:52 2003 +0000
+++ b/math/gsl/Makefile Sat Aug 30 21:50:59 2003 +0000
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.13 2003/08/09 11:11:31 seb Exp $
+# $NetBSD: Makefile,v 1.14 2003/08/30 21:50:59 jtb Exp $
 
-DISTNAME=              gsl-1.3
+DISTNAME=              gsl-1.4
 CATEGORIES=            math devel
 MASTER_SITES=          ${MASTER_SITE_GNU:=gsl/}
 
diff -r 2891a3633444 -r d4c5e0ba3947 math/gsl/PLIST
--- a/math/gsl/PLIST    Sat Aug 30 21:35:52 2003 +0000
+++ b/math/gsl/PLIST    Sat Aug 30 21:50:59 2003 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.6 2003/08/02 13:20:16 seb Exp $
+@comment $NetBSD: PLIST,v 1.7 2003/08/30 21:51:00 jtb Exp $
 bin/gsl-config
 bin/gsl-histogram
 bin/gsl-randist
@@ -21,13 +21,15 @@
 include/gsl/gsl_block_ulong.h
 include/gsl/gsl_block_ushort.h
 include/gsl/gsl_cblas.h
+include/gsl/gsl_cdf.h
 include/gsl/gsl_chebyshev.h
+include/gsl/gsl_check_range.h
 include/gsl/gsl_combination.h
 include/gsl/gsl_complex.h
 include/gsl/gsl_complex_math.h
 include/gsl/gsl_const.h
-include/gsl/gsl_const_cgs.h
-include/gsl/gsl_const_mks.h
+include/gsl/gsl_const_cgsm.h
+include/gsl/gsl_const_mksa.h
 include/gsl/gsl_const_num.h
 include/gsl/gsl_dft_complex.h
 include/gsl/gsl_dft_complex_float.h
@@ -211,33 +213,14 @@
 include/gsl/gsl_version.h
 info/gsl-ref.info
 info/gsl-ref.info-1
-info/gsl-ref.info-10
-info/gsl-ref.info-11
-info/gsl-ref.info-12
-info/gsl-ref.info-13
-info/gsl-ref.info-14
-info/gsl-ref.info-15
-info/gsl-ref.info-16
-info/gsl-ref.info-17
-info/gsl-ref.info-18
-info/gsl-ref.info-19
 info/gsl-ref.info-2
-info/gsl-ref.info-20
-info/gsl-ref.info-21
-info/gsl-ref.info-22
-info/gsl-ref.info-23
 info/gsl-ref.info-3
 info/gsl-ref.info-4
-info/gsl-ref.info-5
-info/gsl-ref.info-6
-info/gsl-ref.info-7
-info/gsl-ref.info-8
-info/gsl-ref.info-9
 lib/libgsl.a
 lib/libgsl.la
 lib/libgsl.so
-lib/libgsl.so.4
-lib/libgsl.so.4.0
+lib/libgsl.so.5
+lib/libgsl.so.5.0
 lib/libgslcblas.a
 lib/libgslcblas.la
 lib/libgslcblas.so
diff -r 2891a3633444 -r d4c5e0ba3947 math/gsl/buildlink2.mk
--- a/math/gsl/buildlink2.mk    Sat Aug 30 21:35:52 2003 +0000
+++ b/math/gsl/buildlink2.mk    Sat Aug 30 21:50:59 2003 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: buildlink2.mk,v 1.4 2003/02/17 01:01:38 jtb Exp $
+# $NetBSD: buildlink2.mk,v 1.5 2003/08/30 21:51:00 jtb Exp $
 
 .if !defined(GSL_BUILDLINK2_MK)
 GSL_BUILDLINK2_MK=              # defined
 
 BUILDLINK_PACKAGES+=           gsl
-BUILDLINK_DEPENDS.gsl?=                gsl>=1.3
+BUILDLINK_DEPENDS.gsl?=                gsl>=1.4
 BUILDLINK_PKGSRCDIR.gsl?=      ../../math/gsl
 BUILDLINK_DEPMETHOD.gsl?=      build
 
diff -r 2891a3633444 -r d4c5e0ba3947 math/gsl/distinfo
--- a/math/gsl/distinfo Sat Aug 30 21:35:52 2003 +0000
+++ b/math/gsl/distinfo Sat Aug 30 21:50:59 2003 +0000
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.9 2003/08/02 13:20:16 seb Exp $
+$NetBSD: distinfo,v 1.10 2003/08/30 21:51:00 jtb Exp $
 
-SHA1 (gsl-1.3.tar.gz) = ecde676adb997adbd507a7a7974bb7f6f69f9d87
-Size (gsl-1.3.tar.gz) = 2052026 bytes
-SHA1 (patch-aa) = a8965df1a505aa43254025e4b03779b5896594c1
+SHA1 (gsl-1.4.tar.gz) = 72de214bc3e2466f196aa98d698002faceb7132c
+Size (gsl-1.4.tar.gz) = 2211031 bytes
+SHA1 (patch-aa) = 56b2b86411ff0f026525d7ec50d582db5a9b37bf
diff -r 2891a3633444 -r d4c5e0ba3947 math/gsl/patches/patch-aa
--- a/math/gsl/patches/patch-aa Sat Aug 30 21:35:52 2003 +0000
+++ b/math/gsl/patches/patch-aa Sat Aug 30 21:50:59 2003 +0000
@@ -1,31 +1,10 @@
-$NetBSD: patch-aa,v 1.5 2003/08/02 13:20:17 seb Exp $
+$NetBSD: patch-aa,v 1.6 2003/08/30 21:51:00 jtb Exp $
 
---- configure.orig     2002-12-18 22:32:51.000000000 +0000
-+++ configure
-@@ -939,13 +939,13 @@ echo "configure:939: checking for workin
- # Run test in a subshell; some versions of sh will print an error if
- # an executable is not found, even if stderr is redirected.
- # Redirect stdin to placate older versions of autoconf.  Sigh.
--if (makeinfo --version) < /dev/null > /dev/null 2>&1; then
--   MAKEINFO=makeinfo
--   echo "$ac_t""found" 1>&6
--else
--   MAKEINFO="$missing_dir/missing makeinfo"
--   echo "$ac_t""missing" 1>&6
--fi
-+#if (makeinfo --version) < /dev/null > /dev/null 2>&1; then
-+#   MAKEINFO=makeinfo
-+#   echo "$ac_t""found" 1>&6
-+#else
-+#   MAKEINFO="$missing_dir/missing makeinfo"
-+#   echo "$ac_t""missing" 1>&6
-+#fi
+--- configure.orig     2003-08-30 22:12:57.000000000 +0100
++++ configure  2003-08-30 22:14:01.000000000 +0100
+@@ -8102,7 +8102,7 @@
  
  
- 
-@@ -7652,7 +7652,7 @@ esac
- # Now restore our (possibly augmented) CFLAGS.
- CFLAGS="$save_cflags"
  GSL_CFLAGS="-I$includedir"
 -GSL_LIBS="-L$libdir -lgsl"
 +GSL_LIBS="-Wl,-R$libdir -L$libdir -lgsl"