[pkgsrc/trunk]: pkgsrc/math/R - correctly depend on devel/gettext-lib, bump r...

[joerg <joerg%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/f34676a7317b
branches:  trunk
changeset: 503928:f34676a7317b
user:      joerg <joerg%pkgsrc.org@localhost>
date:      Thu Dec 01 23:11:26 2005 +0000

description:
- correctly depend on devel/gettext-lib, bump revision for this
- this uses libtool, tell the framework so
- don't declare alloca on DragonFly, it conflicts with system headers
- patch libtool.m4 fragment for DrgaonFly

diffstat:

 math/R/Makefile         |    5 +-
 math/R/distinfo         |    9 ++-
 math/R/patches/patch-ab |   13 +++++
 math/R/patches/patch-ac |  123 +++++++++++++++++++++++++++++++++++++++++++----
 math/R/patches/patch-ae |   13 +++++
 math/R/patches/patch-af |   13 +++++
 math/R/patches/patch-ag |   13 +++++
 math/R/patches/patch-ah |   13 +++++
 math/R/patches/patch-ai |   13 +++++
 9 files changed, 200 insertions(+), 15 deletions(-)

diffs (truncated from 345 to 300 lines):

diff -r f69cf4e5cbca -r f34676a7317b math/R/Makefile
--- a/math/R/Makefile   Thu Dec 01 21:06:13 2005 +0000
+++ b/math/R/Makefile   Thu Dec 01 23:11:26 2005 +0000
@@ -1,6 +1,7 @@
-# $NetBSD: Makefile,v 1.74 2005/09/28 20:52:24 rillig Exp $
+# $NetBSD: Makefile,v 1.75 2005/12/01 23:11:26 joerg Exp $
 
 DISTNAME=              R-2.1.1
+PKGREVISION=           1
 CATEGORIES=            math
 MASTER_SITES=          ${MASTER_SITE_R_CRAN:=base/R-2/}
 
@@ -18,6 +19,7 @@
 USE_TOOLS+=            gmake perl:run sed xmkmf
 USE_GNU_READLINE=      # uses callback interface
 USE_LANGUAGES=         c fortran
+USE_LIBTOOL=           yes
 USE_MAKEINFO=          yes
 TEXINFO_REQD=          4.5
 
@@ -84,6 +86,7 @@
 
 .include "../../archivers/bzip2/buildlink3.mk"
 .include "../../converters/libiconv/buildlink3.mk"
+.include "../../devel/gettext-lib/buildlink3.mk"
 .include "../../devel/pcre/buildlink3.mk"
 .include "../../devel/readline/buildlink3.mk"
 .include "../../devel/zlib/buildlink3.mk"
diff -r f69cf4e5cbca -r f34676a7317b math/R/distinfo
--- a/math/R/distinfo   Thu Dec 01 21:06:13 2005 +0000
+++ b/math/R/distinfo   Thu Dec 01 23:11:26 2005 +0000
@@ -1,9 +1,14 @@
-$NetBSD: distinfo,v 1.24 2005/06/24 12:28:31 markd Exp $
+$NetBSD: distinfo,v 1.25 2005/12/01 23:11:26 joerg Exp $
 
 SHA1 (R-2.1.1.tar.gz) = e43f743c9ad4147f23cf89c771364168b078a0db
 RMD160 (R-2.1.1.tar.gz) = a850608eb5edb90f426331fd2596ba8fc7175dce
 Size (R-2.1.1.tar.gz) = 12644376 bytes
 SHA1 (patch-aa) = 52f7ca0159087a6a5f319dd5476223785fe75a7a
-SHA1 (patch-ac) = 18a9287109499e8263f2869d0cf4b32814760f11
+SHA1 (patch-ab) = d5919d2864c70cc2d541a62099fca35b5d10bb99
+SHA1 (patch-ac) = ce9e1b9f3de07ea3724a1215cfe648770d5c09ca
 SHA1 (patch-ad) = 83c9b046822b1d350daec8739ca4ee2a6b7e1978
+SHA1 (patch-ae) = 89580496f3614deaa6ef81306e3d2247e46839e6
+SHA1 (patch-af) = 84ab0aec4edd9469e1dcf3eb0b06e898265dae1d
+SHA1 (patch-ag) = caa653a3717c4f1173f431865fbef999f350f211
+SHA1 (patch-ah) = 8c12f620ac4923373771b95010df87eb2587b957
 SHA1 (patch-at) = d972e1072a7f6a30b5fbc2e5fa076bc5bdec5952
diff -r f69cf4e5cbca -r f34676a7317b math/R/patches/patch-ab
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/math/R/patches/patch-ab   Thu Dec 01 23:11:26 2005 +0000
@@ -0,0 +1,13 @@
+$NetBSD: patch-ab,v 1.17 2005/12/01 23:11:26 joerg Exp $
+
+--- src/main/errors.c.orig     2005-12-01 22:38:35.000000000 +0000
++++ src/main/errors.c
+@@ -39,7 +39,7 @@ extern void R_ProcessEvents(void);
+ #ifdef HAVE_ALLOCA_H
+ #include <alloca.h>
+ #endif
+-#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__)
++#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__) && !defined(__DragonFly__)
+ extern char *alloca(size_t);
+ #endif
+ 
diff -r f69cf4e5cbca -r f34676a7317b math/R/patches/patch-ac
--- a/math/R/patches/patch-ac   Thu Dec 01 21:06:13 2005 +0000
+++ b/math/R/patches/patch-ac   Thu Dec 01 23:11:26 2005 +0000
@@ -1,8 +1,8 @@
-$NetBSD: patch-ac,v 1.14 2005/05/02 16:57:19 drochner Exp $
+$NetBSD: patch-ac,v 1.15 2005/12/01 23:11:26 joerg Exp $
 
---- configure.orig     2005-04-19 00:11:52.000000000 +0200
+--- configure.orig     2005-06-20 09:02:39.000000000 +0000
 +++ configure
-@@ -2170,7 +2170,7 @@ else
+@@ -2173,7 +2173,7 @@ else
  fi
  
  if test "${want_R_shlib}" = yes; then
@@ -11,7 +11,97 @@
  else
    LIBR=
  fi
-@@ -21681,13 +21681,13 @@ fi
+@@ -6413,7 +6413,7 @@ darwin* | rhapsody*)
+   lt_cv_deplibs_check_method=pass_all
+   ;;
+ 
+-freebsd* | kfreebsd*-gnu)
++freebsd* | kfreebsd*-gnu | dragonfly*)
+   if echo __ELF__ | $CC -E - | grep __ELF__ > /dev/null; then
+     case $host_cpu in
+     i*86 )
+@@ -8934,7 +8934,7 @@ if test -z "$aix_libpath"; then aix_libp
+       ;;
+ 
+     # FreeBSD 3 and greater uses gcc -shared to do shared libraries.
+-    freebsd* | kfreebsd*-gnu)
++    freebsd* | kfreebsd*-gnu | dragonfly*)
+       archive_cmds='$CC -shared -o $lib $libobjs $deplibs $compiler_flags'
+       hardcode_libdir_flag_spec='-R$libdir'
+       hardcode_direct=yes
+@@ -9512,7 +9512,7 @@ kfreebsd*-gnu)
+   dynamic_linker='GNU ld.so'
+   ;;
+ 
+-freebsd*)
++freebsd* | dragonfly*)
+   objformat=`test -x /usr/bin/objformat && /usr/bin/objformat || echo aout`
+   version_type=freebsd-$objformat
+   case $version_type in
+@@ -11892,7 +11892,7 @@ if test -z "$aix_libpath"; then aix_libp
+   freebsd-elf*)
+     archive_cmds_need_lc_CXX=no
+     ;;
+-  freebsd* | kfreebsd*-gnu)
++  freebsd* | kfreebsd*-gnu | dragonfly*)
+     # FreeBSD 3 and later use GNU C++ and GNU ld with standard ELF
+     # conventions
+     ld_shlibs_CXX=yes
+@@ -12599,7 +12599,7 @@ echo $ECHO_N "checking for $compiler opt
+           ;;
+       esac
+       ;;
+-      freebsd* | kfreebsd*-gnu)
++      freebsd* | kfreebsd*-gnu | dragonfly*)
+       # FreeBSD uses GNU C++
+       ;;
+       hpux9* | hpux10* | hpux11*)
+@@ -13210,7 +13210,7 @@ kfreebsd*-gnu)
+   dynamic_linker='GNU ld.so'
+   ;;
+ 
+-freebsd*)
++freebsd* | dragonfly*)
+   objformat=`test -x /usr/bin/objformat && /usr/bin/objformat || echo aout`
+   version_type=freebsd-$objformat
+   case $version_type in
+@@ -15781,7 +15781,7 @@ if test -z "$aix_libpath"; then aix_libp
+       ;;
+ 
+     # FreeBSD 3 and greater uses gcc -shared to do shared libraries.
+-    freebsd* | kfreebsd*-gnu)
++    freebsd* | kfreebsd*-gnu | dragonfly*)
+       archive_cmds_F77='$CC -shared -o $lib $libobjs $deplibs $compiler_flags'
+       hardcode_libdir_flag_spec_F77='-R$libdir'
+       hardcode_direct_F77=yes
+@@ -16359,7 +16359,7 @@ kfreebsd*-gnu)
+   dynamic_linker='GNU ld.so'
+   ;;
+ 
+-freebsd*)
++freebsd* | dragonfly*)
+   objformat=`test -x /usr/bin/objformat && /usr/bin/objformat || echo aout`
+   version_type=freebsd-$objformat
+   case $version_type in
+@@ -18128,7 +18128,7 @@ if test -z "$aix_libpath"; then aix_libp
+       ;;
+ 
+     # FreeBSD 3 and greater uses gcc -shared to do shared libraries.
+-    freebsd* | kfreebsd*-gnu)
++    freebsd* | kfreebsd*-gnu | dragonfly*)
+       archive_cmds_GCJ='$CC -shared -o $lib $libobjs $deplibs $compiler_flags'
+       hardcode_libdir_flag_spec_GCJ='-R$libdir'
+       hardcode_direct_GCJ=yes
+@@ -18706,7 +18706,7 @@ kfreebsd*-gnu)
+   dynamic_linker='GNU ld.so'
+   ;;
+ 
+-freebsd*)
++freebsd* | dragonfly*)
+   objformat=`test -x /usr/bin/objformat && /usr/bin/objformat || echo aout`
+   version_type=freebsd-$objformat
+   case $version_type in
+@@ -21697,13 +21697,13 @@ fi
      ## only need ncurses if libreadline is not statically linked against it
      unset ac_cv_lib_readline_rl_callback_read_char
  
@@ -29,7 +119,7 @@
  cat >conftest.$ac_ext <<_ACEOF
  /* confdefs.h.  */
  _ACEOF
-@@ -21726,35 +21726,35 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
+@@ -21742,35 +21742,35 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
    ac_status=$?
    echo "$as_me:$LINENO: \$? = $ac_status" >&5
    (exit $ac_status); }; }; then
@@ -76,7 +166,7 @@
  cat >conftest.$ac_ext <<_ACEOF
  /* confdefs.h.  */
  _ACEOF
-@@ -21793,35 +21793,35 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
+@@ -21809,35 +21809,35 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
    ac_status=$?
    echo "$as_me:$LINENO: \$? = $ac_status" >&5
    (exit $ac_status); }; }; then
@@ -123,7 +213,7 @@
  cat >conftest.$ac_ext <<_ACEOF
  /* confdefs.h.  */
  _ACEOF
-@@ -21860,25 +21860,25 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
+@@ -21876,25 +21876,25 @@ if { (eval echo "$as_me:$LINENO: \"$ac_l
    ac_status=$?
    echo "$as_me:$LINENO: \$? = $ac_status" >&5
    (exit $ac_status); }; }; then
@@ -156,7 +246,7 @@
  
  fi
  
-@@ -27049,6 +27049,7 @@ cat > conftest.c <<EOF
+@@ -27065,6 +27065,7 @@ cat > conftest.c <<EOF
  #else
  # define F77_SYMBOL(x)   x
  #endif
@@ -164,7 +254,7 @@
  int main () {
    exit(0);
  }
-@@ -27117,6 +27118,9 @@ cat > conftest.c <<EOF
+@@ -27133,6 +27134,9 @@ cat > conftest.c <<EOF
  
  extern void F77_SYMBOL(cftest)(int *a, int *b, double *x, double *y);
  
@@ -174,7 +264,7 @@
  int main () {
    int a[3] = {17, 237, 2000000000}, b[2], res = 0;
    double x[3] = {3.14159265, 123.456789, 2.3e34}, z[3];
-@@ -27205,6 +27209,9 @@ typedef struct {
+@@ -27221,6 +27225,9 @@ typedef struct {
  
  extern void F77_SYMBOL(cftest)(Rcomplex *x);
  
@@ -184,7 +274,7 @@
  int main () {
      Rcomplex z[3];
  
-@@ -28031,157 +28038,6 @@ echo "${ECHO_T}no" >&6
+@@ -28047,157 +28054,6 @@ echo "${ECHO_T}no" >&6
  fi
  
      fi
@@ -342,7 +432,16 @@
      if test "${GXX}" = yes; then
        ac_safe=_mieee
  echo "$as_me:$LINENO: checking whether ${CXX-c++} accepts -mieee" >&5
-@@ -29135,6 +28991,7 @@ fi ;;
+@@ -29093,7 +28949,7 @@ fi ;;
+       SHLIB_LIBADD="-lcc_dynamic"
+     fi
+     ;;
+-  freebsd*)
++  freebsd* | dragonfly*)
+     ## Only sure for FreeBSD 3 and above.
+     main_ldflags="-export-dynamic"
+     shlib_ldflags="-shared"
+@@ -29151,6 +29007,7 @@ fi ;;
      fpicflags=
      ;;
    netbsd*)
diff -r f69cf4e5cbca -r f34676a7317b math/R/patches/patch-ae
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/math/R/patches/patch-ae   Thu Dec 01 23:11:26 2005 +0000
@@ -0,0 +1,13 @@
+$NetBSD: patch-ae,v 1.9 2005/12/01 23:11:27 joerg Exp $
+
+--- src/main/pcre.c.orig       2005-12-01 22:44:25.000000000 +0000
++++ src/main/pcre.c
+@@ -37,7 +37,7 @@
+ #ifdef HAVE_ALLOCA_H
+ #include <alloca.h>
+ #endif
+-#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__)
++#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__) && !defined(__DragonFly__)
+ extern char *alloca(size_t);
+ #endif
+ 
diff -r f69cf4e5cbca -r f34676a7317b math/R/patches/patch-af
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/math/R/patches/patch-af   Thu Dec 01 23:11:26 2005 +0000
@@ -0,0 +1,13 @@
+$NetBSD: patch-af,v 1.9 2005/12/01 23:11:27 joerg Exp $
+
+--- src/main/printarray.c.orig 2005-12-01 22:45:25.000000000 +0000
++++ src/main/printarray.c
+@@ -45,7 +45,7 @@
+ #ifdef HAVE_ALLOCA_H
+ #include <alloca.h>
+ #endif
+-#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__)
++#if !HAVE_DECL_ALLOCA && !defined(__FreeBSD__) && !defined(__DragonFly__)
+ extern char *alloca(size_t);
+ #endif
+ 
diff -r f69cf4e5cbca -r f34676a7317b math/R/patches/patch-ag
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/math/R/patches/patch-ag   Thu Dec 01 23:11:26 2005 +0000
@@ -0,0 +1,13 @@
+$NetBSD: patch-ag,v 1.9 2005/12/01 23:11:27 joerg Exp $
+