[pkgsrc/trunk]: pkgsrc/parallel/openmpi Update to OpenMPI 1.4.1:

[asau <asau%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/6fc6e6ec052c
branches:  trunk
changeset: 569800:6fc6e6ec052c
user:      asau <asau%pkgsrc.org@localhost>
date:      Tue Jan 19 00:45:58 2010 +0000

description:
Update to OpenMPI 1.4.1:

- Update to PLPA v1.3.2, addressing a licensing issue identified by
  the Fedora project.  See
  https://svn.open-mpi.org/trac/plpa/changeset/262 for details.
- Add check for malformed checkpoint metadata files (Ticket #2141).
- Fix error path in ompi-checkpoint when not able to checkpoint
  (Ticket #2138).
- Cleanup component release logic when selecting checkpoint/restart
  enabled components (Ticket #2135).
- Fixed VT node name detection for Cray XT platforms, and fixed some
  broken VT documentation files.
- Fix a possible race condition in tearing down RDMA CM-based
  connections.
- Relax error checking on MPI_GRAPH_CREATE.  Thanks to David Singleton
  for pointing out the issue.
- Fix a shared memory "hang" problem that occurred on x86/x86_64
  platforms when used with the GNU >=4.4.x compiler series.
- Add fix for Libtool 2.2.6b's problems with the PGI 10.x compiler
  suite.  Inspired directly from the upstream Libtool patches that fix
  the issue (but we need something working before the next Libtool
  release).

diffstat:

 parallel/openmpi/Makefile |  5 ++---
 parallel/openmpi/PLIST    |  3 ++-
 parallel/openmpi/PLIST.vt |  3 +--
 parallel/openmpi/distinfo |  8 ++++----
 4 files changed, 9 insertions(+), 10 deletions(-)

diffs (60 lines):

diff -r 014a09d3ea0a -r 6fc6e6ec052c parallel/openmpi/Makefile
--- a/parallel/openmpi/Makefile Mon Jan 18 23:50:42 2010 +0000
+++ b/parallel/openmpi/Makefile Tue Jan 19 00:45:58 2010 +0000
@@ -1,7 +1,6 @@
-# $NetBSD: Makefile,v 1.3 2009/12/15 22:04:15 joerg Exp $
+# $NetBSD: Makefile,v 1.4 2010/01/19 00:45:58 asau Exp $
 
-DISTNAME=      openmpi-1.4
-PKGREVISION=   1
+DISTNAME=      openmpi-1.4.1
 CATEGORIES=    parallel
 MASTER_SITES=  http://www.open-mpi.org/software/ompi/v1.4/downloads/
 EXTRACT_SUFX=  .tar.bz2
diff -r 014a09d3ea0a -r 6fc6e6ec052c parallel/openmpi/PLIST
--- a/parallel/openmpi/PLIST    Mon Jan 18 23:50:42 2010 +0000
+++ b/parallel/openmpi/PLIST    Tue Jan 19 00:45:58 2010 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.1.1.1 2009/12/12 23:30:01 asau Exp $
+@comment $NetBSD: PLIST,v 1.2 2010/01/19 00:45:58 asau Exp $
 bin/mpiCC
 bin/mpic++
 bin/mpicc
@@ -506,3 +506,4 @@
 share/openmpi/mpicxx-wrapper-data.txt
 share/openmpi/mpif77-wrapper-data.txt
 share/openmpi/mpif90-wrapper-data.txt
+share/openmpi/openmpi-valgrind.supp
diff -r 014a09d3ea0a -r 6fc6e6ec052c parallel/openmpi/PLIST.vt
--- a/parallel/openmpi/PLIST.vt Mon Jan 18 23:50:42 2010 +0000
+++ b/parallel/openmpi/PLIST.vt Tue Jan 19 00:45:58 2010 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST.vt,v 1.1.1.1 2009/12/12 23:30:01 asau Exp $
+@comment $NetBSD: PLIST.vt,v 1.2 2010/01/19 00:45:58 asau Exp $
 bin/mpiCC-vt
 bin/mpic++-vt
 bin/mpicc-vt
@@ -64,7 +64,6 @@
 share/vampirtrace/doc/opari/LICENSE
 share/vampirtrace/doc/opari/Readme.html
 share/vampirtrace/doc/opari/lacsi01.pdf
-share/vampirtrace/doc/opari/lacsi01.ps.gz
 share/vampirtrace/doc/opari/opari-logo-100.gif
 share/vampirtrace/doc/otf/ChangeLog
 share/vampirtrace/doc/otf/LICENSE
diff -r 014a09d3ea0a -r 6fc6e6ec052c parallel/openmpi/distinfo
--- a/parallel/openmpi/distinfo Mon Jan 18 23:50:42 2010 +0000
+++ b/parallel/openmpi/distinfo Tue Jan 19 00:45:58 2010 +0000
@@ -1,8 +1,8 @@
-$NetBSD: distinfo,v 1.1.1.1 2009/12/12 23:30:01 asau Exp $
+$NetBSD: distinfo,v 1.2 2010/01/19 00:45:58 asau Exp $
 
-SHA1 (openmpi-1.4.tar.bz2) = 8e98ceae223f52f147d5151779ed1a43f2865a7f
-RMD160 (openmpi-1.4.tar.bz2) = 61f7665c69ea019d347b983062a1eee0ae807c9b
-Size (openmpi-1.4.tar.bz2) = 6699638 bytes
+SHA1 (openmpi-1.4.1.tar.bz2) = c5107c03a9fc738dfb4f309b470d052becfdde19
+RMD160 (openmpi-1.4.1.tar.bz2) = c6fd5f0871eb5f963fe58270f5340a2629f5fd68
+Size (openmpi-1.4.1.tar.bz2) = 6571835 bytes
 SHA1 (patch-aa) = dfc2eb59ea592823d93a7ae3e223e703450201ad
 SHA1 (patch-ab) = c4be561af983b38803ba1f76a4ff5a6646072c3a
 SHA1 (patch-ac) = 2eb37bf842278c712561e30457d7e00889d12dcd