[pkgsrc/trunk]: pkgsrc/math/glpk Changes 4.54:

[adam <adam%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/483c25ce05f3
branches:  trunk
changeset: 632579:483c25ce05f3
user:      adam <adam%pkgsrc.org@localhost>
date:      Tue Apr 01 08:38:35 2014 +0000

description:
Changes 4.54:

Block-triangular LU-factorization was implemented to be used
on computing an initial factorization of the basis matrix.

A new version of the Schur-complement-based factorization
module was included in the package. Now it can be used along
with plain as well as with block-triangular LU-factorization.

Currently the following flags can be used to specify the type
of the basis matrix factorization (glp_bfcp.type):

GLP_BF_LUF + GLP_BF_FT   LUF, Forrest-Tomlin update (default)
GLP_BF_LUF + GLP_BF_BG   LUF, Schur complement, Bartels-Golub
                         update
GLP_BF_LUF + GLP_BF_GR   LUF, Schur complement, Givens rotation
                         update
GLP_BF_BTF + GLP_BF_BG   BTF, Schur complement, Bartels-Golub
                         update
GLP_BF_BTF + GLP_BF_GR   BTF, Schur complement, Givens rotation
                         update

In case of GLP_BF_FT the update is applied to matrix U, while
in cases of GLP_BF_BG and GLP_BF_GR the update is applied to
the Schur complement.

Corresponding new options --luf and --btf were added to glpsol.

For more details please see a new edition of the GLPK reference
manual included in the distribution.

A minor bug (in reporting the mip solution status) was fixed.

A call to "iodbc-config --cflags" was added in configure.ac
to correctly detect iodbc flags.

diffstat:

 math/glpk/Makefile                      |   5 +-
 math/glpk/buildlink3.mk                 |   3 +-
 math/glpk/distinfo                      |  10 ++--
 math/glpk/patches/patch-src_Makefile.in |  64 +++++++++++++++++++++++++++++++++
 math/glpk/patches/patch-src_glpapi06.c  |  15 -------
 5 files changed, 74 insertions(+), 23 deletions(-)

diffs (137 lines):

diff -r 86a289650c1b -r 483c25ce05f3 math/glpk/Makefile
--- a/math/glpk/Makefile        Tue Apr 01 08:37:23 2014 +0000
+++ b/math/glpk/Makefile        Tue Apr 01 08:38:35 2014 +0000
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.39 2014/02/14 09:25:49 adam Exp $
+# $NetBSD: Makefile,v 1.40 2014/04/01 08:38:35 adam Exp $
 
-DISTNAME=      glpk-4.53
+DISTNAME=      glpk-4.54
 CATEGORIES=    math
 MASTER_SITES=  ${MASTER_SITE_GNU:=glpk/}
 
@@ -16,4 +16,5 @@
 TEST_TARGET=           check
 
 .include "../../devel/gmp/buildlink3.mk"
+.include "../../devel/zlib/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"
diff -r 86a289650c1b -r 483c25ce05f3 math/glpk/buildlink3.mk
--- a/math/glpk/buildlink3.mk   Tue Apr 01 08:37:23 2014 +0000
+++ b/math/glpk/buildlink3.mk   Tue Apr 01 08:38:35 2014 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: buildlink3.mk,v 1.10 2010/03/24 21:54:16 asau Exp $
+# $NetBSD: buildlink3.mk,v 1.11 2014/04/01 08:38:35 adam Exp $
 
 BUILDLINK_TREE+=       glpk
 
@@ -10,6 +10,7 @@
 BUILDLINK_PKGSRCDIR.glpk?=     ../../math/glpk
 
 .include "../../devel/gmp/buildlink3.mk"
+.include "../../devel/zlib/buildlink3.mk"
 .endif # GLPK_BUILDLINK3_MK
 
 BUILDLINK_TREE+=       -glpk
diff -r 86a289650c1b -r 483c25ce05f3 math/glpk/distinfo
--- a/math/glpk/distinfo        Tue Apr 01 08:37:23 2014 +0000
+++ b/math/glpk/distinfo        Tue Apr 01 08:38:35 2014 +0000
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.32 2014/02/14 09:25:49 adam Exp $
+$NetBSD: distinfo,v 1.33 2014/04/01 08:38:35 adam Exp $
 
-SHA1 (glpk-4.53.tar.gz) = 7f61e646d4d669805ac252d62005dfd2ff818d23
-RMD160 (glpk-4.53.tar.gz) = 457c0ee03c61ab395f5411311e2baf3c3583c9b5
-Size (glpk-4.53.tar.gz) = 2803321 bytes
-SHA1 (patch-src_glpapi06.c) = 0037423f2a4e85d2e93c659debdf6191c01ef695
+SHA1 (glpk-4.54.tar.gz) = 69d9c5d83271d34de1a58d2de2f7ababab975492
+RMD160 (glpk-4.54.tar.gz) = 4de0079c712dcab817a1d7b936f2ba4b1252129f
+Size (glpk-4.54.tar.gz) = 3098202 bytes
+SHA1 (patch-src_Makefile.in) = a28908145e2f4798679f34264dffa2780c7c4e3b
diff -r 86a289650c1b -r 483c25ce05f3 math/glpk/patches/patch-src_Makefile.in
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/math/glpk/patches/patch-src_Makefile.in   Tue Apr 01 08:38:35 2014 +0000
@@ -0,0 +1,64 @@
+$NetBSD: patch-src_Makefile.in,v 1.1 2014/04/01 08:38:35 adam Exp $
+
+Use external zlib.
+
+--- src/Makefile.in.orig       2014-04-01 08:25:18.000000000 +0000
++++ src/Makefile.in
+@@ -94,7 +94,7 @@ am__uninstall_files_from_dir = { \
+   }
+ am__installdirs = "$(DESTDIR)$(libdir)" "$(DESTDIR)$(includedir)"
+ LTLIBRARIES = $(lib_LTLIBRARIES)
+-libglpk_la_LIBADD =
++libglpk_la_LIBADD = -lz
+ am_libglpk_la_OBJECTS = libglpk_la-avl.lo libglpk_la-bfd.lo \
+       libglpk_la-bfx.lo libglpk_la-glpapi01.lo \
+       libglpk_la-glpapi02.lo libglpk_la-glpapi03.lo \
+@@ -151,13 +151,7 @@ am_libglpk_la_OBJECTS = libglpk_la-avl.l
+       libglpk_la-strspx.lo libglpk_la-strtrim.lo \
+       libglpk_la-triang.lo libglpk_la-wclique.lo \
+       libglpk_la-wclique1.lo libglpk_la-proxy.lo \
+-      libglpk_la-proxy1.lo libglpk_la-adler32.lo \
+-      libglpk_la-compress.lo libglpk_la-crc32.lo \
+-      libglpk_la-deflate.lo libglpk_la-gzclose.lo \
+-      libglpk_la-gzlib.lo libglpk_la-gzread.lo libglpk_la-gzwrite.lo \
+-      libglpk_la-inffast.lo libglpk_la-inflate.lo \
+-      libglpk_la-inftrees.lo libglpk_la-trees.lo \
+-      libglpk_la-uncompr.lo libglpk_la-zio.lo libglpk_la-zutil.lo
++      libglpk_la-proxy1.lo
+ libglpk_la_OBJECTS = $(am_libglpk_la_OBJECTS)
+ libglpk_la_LINK = $(LIBTOOL) --tag=CC $(AM_LIBTOOLFLAGS) \
+       $(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
+@@ -310,8 +304,7 @@ libglpk_la_CPPFLAGS = \
+ -I$(srcdir)/env \
+ -I$(srcdir)/minisat \
+ -I$(srcdir)/misc \
+--I$(srcdir)/proxy \
+--I$(srcdir)/zlib
++-I$(srcdir)/proxy
+ 
+ libglpk_la_LDFLAGS = \
+ -version-info 37:1:1 \
+@@ -447,22 +440,7 @@ misc/triang.c \
+ misc/wclique.c \
+ misc/wclique1.c \
+ proxy/proxy.c \
+-proxy/proxy1.c \
+-zlib/adler32.c \
+-zlib/compress.c \
+-zlib/crc32.c \
+-zlib/deflate.c \
+-zlib/gzclose.c \
+-zlib/gzlib.c \
+-zlib/gzread.c \
+-zlib/gzwrite.c \
+-zlib/inffast.c \
+-zlib/inflate.c \
+-zlib/inftrees.c \
+-zlib/trees.c \
+-zlib/uncompr.c \
+-zlib/zio.c \
+-zlib/zutil.c
++proxy/proxy1.c
+ 
+ all: all-am
+ 
diff -r 86a289650c1b -r 483c25ce05f3 math/glpk/patches/patch-src_glpapi06.c
--- a/math/glpk/patches/patch-src_glpapi06.c    Tue Apr 01 08:37:23 2014 +0000
+++ /dev/null   Thu Jan 01 00:00:00 1970 +0000
@@ -1,15 +0,0 @@
-$NetBSD: patch-src_glpapi06.c,v 1.1 2014/02/14 09:25:49 adam Exp $
-
-Function should return a value.
-
---- src/glpapi06.c.orig        2014-02-14 09:20:28.000000000 +0000
-+++ src/glpapi06.c
-@@ -815,7 +815,7 @@ int glp_get_it_cnt(glp_prob *P)
- int glp_set_it_cnt(glp_prob *P, int it_cnt)
- {     /* set simplex solver iteration count */
-       P->it_cnt = it_cnt;
--      return;
-+      return P->it_cnt;
- }
- #endif
-