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[pkgsrc/trunk]: pkgsrc/parallel/sge Update sge to 6.2.2.1
details: https://anonhg.NetBSD.org/pkgsrc/rev/57f0f78a3e68
branches: trunk
changeset: 392933:57f0f78a3e68
user: markd <markd%pkgsrc.org@localhost>
date: Wed May 13 21:00:25 2009 +0000
description:
Update sge to 6.2.2.1
Grid Engine 6.2, which has undergone significant changes in qmaster to
significantly improve its scalability in challenging environments, adds
powerful features to the core system, introduces multi cluster support
for the Accounting and Reporting Console (ARCo) and comes with a new
module extending the scope of Grid Engine to a new domain of use cases:
the Service Domain Manager (SDM), aka. project Hedeby allows to
dynamically (re-)assign computational resources on demand.
plus lots of bug fixes.
diffstat:
parallel/sge/MESSAGE | 6 +-
parallel/sge/Makefile | 30 ++++++++++--------
parallel/sge/PLIST | 68 ++++++++++++++++++++++++++++++++++++------
parallel/sge/patches/patch-aa | 13 ++++++++
parallel/sge/patches/patch-ab | 13 ++++++++
parallel/sge/patches/patch-ac | 13 ++++++++
parallel/sge/patches/patch-ad | 13 ++++++++
parallel/sge/patches/patch-ae | 13 ++++++++
parallel/sge/patches/patch-af | 13 ++++++++
parallel/sge/patches/patch-ag | 13 ++++++++
parallel/sge/patches/patch-ah | 34 ---------------------
parallel/sge/patches/patch-ai | 17 ----------
parallel/sge/patches/patch-ak | 36 ++++++++++++++--------
parallel/sge/patches/patch-am | 39 ++++++++++++++++++++----
parallel/sge/patches/patch-au | 13 --------
parallel/sge/patches/patch-av | 15 +++++++++
parallel/sge/patches/patch-bd | 21 +++++++++---
parallel/sge/patches/patch-bm | 22 ++++++------
18 files changed, 264 insertions(+), 128 deletions(-)
diffs (truncated from 797 to 300 lines):
diff -r 717f5b99d060 -r 57f0f78a3e68 parallel/sge/MESSAGE
--- a/parallel/sge/MESSAGE Wed May 13 19:02:18 2009 +0000
+++ b/parallel/sge/MESSAGE Wed May 13 21:00:25 2009 +0000
@@ -1,10 +1,10 @@
===========================================================================
-$NetBSD: MESSAGE,v 1.3 2006/10/19 11:51:27 markd Exp $
+$NetBSD: MESSAGE,v 1.4 2009/05/13 21:00:25 markd Exp $
You will need to add the following lines to /etc/services:
-sge_qmaster 536/tcp
-sge_execd 537/tcp
+sge_qmaster 6444/tcp
+sge_execd 6445/tcp
In addition after installation, you need to set up SGE. To configure the
master node of the cluster, run:
diff -r 717f5b99d060 -r 57f0f78a3e68 parallel/sge/Makefile
--- a/parallel/sge/Makefile Wed May 13 19:02:18 2009 +0000
+++ b/parallel/sge/Makefile Wed May 13 21:00:25 2009 +0000
@@ -1,10 +1,10 @@
-# $NetBSD: Makefile,v 1.34 2008/11/26 10:20:08 markd Exp $
+# $NetBSD: Makefile,v 1.35 2009/05/13 21:00:25 markd Exp $
#
-PKGNAME= sge-6.1.5
-DISTNAME= ge-V61u5_TAG-src
+PKGNAME= sge-6.2.2.1
+DISTNAME= ge-V62u2_1_TAG-src
CATEGORIES= parallel sysutils
-MASTER_SITES= http://gridengine.sunsource.net/files/documents/7/182/
+MASTER_SITES= http://gridengine.sunsource.net/files/documents/7/197/
MAINTAINER= pkgsrc-users%NetBSD.org@localhost
HOMEPAGE= http://gridengine.sunsource.net/
@@ -91,16 +91,18 @@
${ECHO} " `${WRKSRC}/source/dist/util/arch`" ; \
${FALSE} ; \
fi
+ ( ${ECHO} "set OPENSSL_HOME = ${SSL_PREFIX}" ; \
+ ${ECHO} "set BERKELEYDB_HOME = ${BUILDLINK_PREFIX.db4}" ; \
+ ${ECHO} "set BDB_INCLUDE_SUBDIR = db4" ; \
+ ${ECHO} "set BDB_LIB_SUFFIX = 4" ; \
+ ${ECHO} "set PERL = ${PERL5}" ) > ${WRKSRC}/source/aimk.private
+ ( ${ECHO} "OPENSSLBASE=${SSL_PREFIX}" ; \
+ ${ECHO} "BERKELEYDBBASE=${BUILDLINK_PREFIX.db4}" ) > ${WRKSRC}/source/distinst.private
-pre-configure:
-.for __tmp__ in source/dist/util/arch_variables source/scripts/distinst.site source/aimk.site
- ${MV} ${WRKSRC}/${__tmp__} ${WRKSRC}/${__tmp__}.bak
- ${SED} -e 's;@rcd_dir@;${RCD_SCRIPTS_DIR};g' -e 's;@ssl_prefix@;${SSL_PREFIX};g' \
- -e 's;@db4_prefix@;${BUILDLINK_PREFIX.db4};g' \
- -e 's;@perl5@;${PERL5};g' ${WRKSRC}/${__tmp__}.bak > \
- ${WRKSRC}/${__tmp__}
- ${RM} ${WRKSRC}/${__tmp__}.bak
-.endfor
+SUBST_CLASSES+= paths
+SUBST_STAGE.paths= post-patch
+SUBST_FILES.paths= source/dist/util/arch_variables
+SUBST_SED.paths= -e 's;@rcd_dir@;${RCD_SCRIPTS_DIR};'
do-configure:
.for __prog__ in qmake qtcsh
@@ -123,7 +125,7 @@
#${CHOWN} ${SGE_USER} ${DESTDIR}${SGE_ROOT}
#${CHGRP} ${SGE_GROUP} ${DESTDIR}${SGE_ROOT}
cd ${WRKSRC}/source && \
- ${ECHO} "Y" | ${SETENV} LOCALBASE=${LOCALBASE} DESTDIR=${DESTDIR} SGE_ROOT=${SGE_ROOT} ./scripts/distinst -local -allall -nobdb -noopenssl ${SGE_ARCH}
+ ${ECHO} "Y" | ${SETENV} LOCALBASE=${LOCALBASE} DESTDIR=${DESTDIR} SGE_ROOT=${SGE_ROOT} ./scripts/distinst -local -all -nobdb -noopenssl ${SGE_ARCH} -- doc man
for f in archive checkpoint deadlock dump load printlog recover stat upgrade verify ; do \
ln -s ${DESTDIR}${LOCALBASE}/bin/db4_$${f} ${DESTDIR}${SGE_ROOT}/utilbin/${SGE_ARCH}/db_$${f} ; done
ln -s ${DESTDIR}${LOCALBASE}/bin/berkeley_db4_svc ${DESTDIR}${SGE_ROOT}/utilbin/${SGE_ARCH}/berkeley_db_svc
diff -r 717f5b99d060 -r 57f0f78a3e68 parallel/sge/PLIST
--- a/parallel/sge/PLIST Wed May 13 19:02:18 2009 +0000
+++ b/parallel/sge/PLIST Wed May 13 21:00:25 2009 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.4 2008/09/15 16:30:57 ahoka Exp $
+@comment $NetBSD: PLIST,v 1.5 2009/05/13 21:00:25 markd Exp $
bin/qacct
bin/qalter
bin/qconf
@@ -11,9 +11,12 @@
bin/qmon
bin/qping
bin/qquota
+bin/qrdel
bin/qresub
bin/qrls
bin/qrsh
+bin/qrstat
+bin/qrsub
bin/qselect
bin/qsh
bin/qstat
@@ -33,9 +36,12 @@
sge/bin/${SGE_ARCH}/qmon
sge/bin/${SGE_ARCH}/qping
sge/bin/${SGE_ARCH}/qquota
+sge/bin/${SGE_ARCH}/qrdel
sge/bin/${SGE_ARCH}/qresub
sge/bin/${SGE_ARCH}/qrls
sge/bin/${SGE_ARCH}/qrsh
+sge/bin/${SGE_ARCH}/qrstat
+sge/bin/${SGE_ARCH}/qrsub
sge/bin/${SGE_ARCH}/qselect
sge/bin/${SGE_ARCH}/qsh
sge/bin/${SGE_ARCH}/qstat
@@ -44,7 +50,6 @@
sge/bin/${SGE_ARCH}/sge_coshepherd
sge/bin/${SGE_ARCH}/sge_execd
sge/bin/${SGE_ARCH}/sge_qmaster
-sge/bin/${SGE_ARCH}/sge_schedd
sge/bin/${SGE_ARCH}/sge_shadowd
sge/bin/${SGE_ARCH}/sge_shepherd
sge/bin/${SGE_ARCH}/sgepasswd
@@ -53,6 +58,7 @@
sge/catman/cat/cat1/gethostname.1
sge/catman/cat/cat1/getservbyname.1
sge/catman/cat/cat1/hostnameutils.1
+sge/catman/cat/cat1/jsv.1
sge/catman/cat/cat1/qacct.1
sge/catman/cat/cat1/qalter.1
sge/catman/cat/cat1/qconf.1
@@ -65,9 +71,12 @@
sge/catman/cat/cat1/qmon.1
sge/catman/cat/cat1/qping.1
sge/catman/cat/cat1/qquota.1
+sge/catman/cat/cat1/qrdel.1
sge/catman/cat/cat1/qresub.1
sge/catman/cat/cat1/qrls.1
sge/catman/cat/cat1/qrsh.1
+sge/catman/cat/cat1/qrstat.1
+sge/catman/cat/cat1/qrsub.1
sge/catman/cat/cat1/qselect.1
sge/catman/cat/cat1/qsh.1
sge/catman/cat/cat1/qstat.1
@@ -120,6 +129,7 @@
sge/catman/cat/cat3/drmaa_wifexited.3
sge/catman/cat/cat3/drmaa_wifsignaled.3
sge/catman/cat/cat3/drmaa_wtermsig.3
+sge/catman/cat/cat3/jsv_script_interface.3
sge/catman/cat/cat5/access_list.5
sge/catman/cat/cat5/accounting.5
sge/catman/cat/cat5/bootstrap.5
@@ -146,11 +156,12 @@
sge/catman/cat/cat5/user.5
sge/catman/cat/cat5/usermapping.5
sge/catman/cat/cat8/SGE_Helper_Service.exe.8
+sge/catman/cat/cat8/sge_ca.8
sge/catman/cat/cat8/sge_execd.8
sge/catman/cat/cat8/sge_qmaster.8
-sge/catman/cat/cat8/sge_schedd.8
sge/catman/cat/cat8/sge_shadowd.8
sge/catman/cat/cat8/sge_shepherd.8
+sge/catman/cat/cat8/sge_st.8
sge/ckpt/README.cpr
sge/ckpt/README.cray
sge/ckpt/checkpoint_command
@@ -169,9 +180,7 @@
sge/ckpt/sx6_clean_command
sge/ckpt/sx6_migration_command
sge/ckpt/sx6_restart_command
-sge/doc/README-Autoinstall.txt
sge/doc/README-DRMAA.txt
-sge/doc/README-Upgrade.txt
sge/doc/arc_depend_irix.asc
sge/doc/arc_depend_solaris.asc
sge/doc/load_parameters.asc
@@ -191,7 +200,6 @@
sge/examples/drmaa/howto5.c
sge/examples/drmaa/howto6.c
sge/examples/jobs/array_submitter.sh
-sge/examples/jobs/hello.bat
sge/examples/jobs/jobnet_submitter.sh
sge/examples/jobs/pascal.sh
sge/examples/jobs/pminiworm.sh
@@ -199,7 +207,6 @@
sge/examples/jobs/sleeper.sh
sge/examples/jobs/step_A_array_submitter.sh
sge/examples/jobs/step_B_array_submitter.sh
-sge/examples/jobs/worker.exe
sge/examples/jobs/worker.sh
sge/examples/jobsbin/${SGE_ARCH}/work
sge/include/drmaa.h
@@ -208,7 +215,6 @@
sge/install_qmaster
sge/lib/${SGE_ARCH}/libXltree.so
sge/lib/${SGE_ARCH}/libdrmaa.so
-sge/lib/${SGE_ARCH}/libdrmaa.so.0.95
sge/lib/${SGE_ARCH}/libdrmaa.so.1.0
sge/lib/${SGE_ARCH}/libjuti.so
sge/lib/${SGE_ARCH}/libspoolb.so
@@ -218,6 +224,7 @@
sge/man/man1/gethostname.1
sge/man/man1/getservbyname.1
sge/man/man1/hostnameutils.1
+sge/man/man1/jsv.1
sge/man/man1/qacct.1
sge/man/man1/qalter.1
sge/man/man1/qconf.1
@@ -230,9 +237,12 @@
sge/man/man1/qmon.1
sge/man/man1/qping.1
sge/man/man1/qquota.1
+sge/man/man1/qrdel.1
sge/man/man1/qresub.1
sge/man/man1/qrls.1
sge/man/man1/qrsh.1
+sge/man/man1/qrstat.1
+sge/man/man1/qrsub.1
sge/man/man1/qselect.1
sge/man/man1/qsh.1
sge/man/man1/qstat.1
@@ -285,6 +295,7 @@
sge/man/man3/drmaa_wifexited.3
sge/man/man3/drmaa_wifsignaled.3
sge/man/man3/drmaa_wtermsig.3
+sge/man/man3/jsv_script_interface.3
sge/man/man5/access_list.5
sge/man/man5/accounting.5
sge/man/man5/bootstrap.5
@@ -311,11 +322,12 @@
sge/man/man5/user.5
sge/man/man5/usermapping.5
sge/man/man8/SGE_Helper_Service.exe.8
+sge/man/man8/sge_ca.8
sge/man/man8/sge_execd.8
sge/man/man8/sge_qmaster.8
-sge/man/man8/sge_schedd.8
sge/man/man8/sge_shadowd.8
sge/man/man8/sge_shepherd.8
+sge/man/man8/sge_st.8
sge/mpi/README
sge/mpi/README.atm
sge/mpi/SunHPCT5/README
@@ -358,6 +370,8 @@
sge/qmon/PIXMAPS/21cal.xpm
sge/qmon/PIXMAPS/21cal_ins.xpm
sge/qmon/PIXMAPS/aclask.xpm
+sge/qmon/PIXMAPS/ar.xpm
+sge/qmon/PIXMAPS/big/toolbar_ar.xpm
sge/qmon/PIXMAPS/big/toolbar_browser.xpm
sge/qmon/PIXMAPS/big/toolbar_calendar.xpm
sge/qmon/PIXMAPS/big/toolbar_ckpt.xpm
@@ -440,6 +454,7 @@
sge/qmon/PIXMAPS/stdoutput_ins.xpm
sge/qmon/PIXMAPS/str.xpm
sge/qmon/PIXMAPS/time.xpm
+sge/qmon/PIXMAPS/toolbar_ar.xpm
sge/qmon/PIXMAPS/toolbar_browser.xpm
sge/qmon/PIXMAPS/toolbar_calendar.xpm
sge/qmon/PIXMAPS/toolbar_ckpt.xpm
@@ -494,9 +509,15 @@
sge/util/install_modules/inst_schedd_high.conf
sge/util/install_modules/inst_schedd_max.conf
sge/util/install_modules/inst_schedd_normal.conf
+sge/util/install_modules/inst_st.sh
sge/util/install_modules/inst_template.conf
-sge/util/install_modules/inst_update.sh
+sge/util/jaas.config.template
+sge/util/java.policy.template
+sge/util/jmxremote.access
+sge/util/jmxremote.password
sge/util/logchecker.sh
+sge/util/logging.properties.template
+sge/util/management.properties.template
sge/util/qtask
sge/util/rctemplates/darwin_template
sge/util/rctemplates/sgebdb_template
@@ -553,6 +574,12 @@
sge/util/resources/centry/virtual_free
sge/util/resources/centry/virtual_total
sge/util/resources/centry/virtual_used
+sge/util/resources/jsv/JSV.pm
+sge/util/resources/jsv/jsv.pl
+sge/util/resources/jsv/jsv.sh
+sge/util/resources/jsv/jsv.tcl
+sge/util/resources/jsv/jsv_include.sh
+sge/util/resources/jsv/jsv_include.tcl
sge/util/resources/loadsensors/calendar.sh
sge/util/resources/loadsensors/ibm-loadsensor
sge/util/resources/loadsensors/interix-loadsensor.sh
@@ -565,12 +592,15 @@
sge/util/resources/pe/make.sge_pqs_api
sge/util/resources/schemas/qhost/qhost.xsd
sge/util/resources/schemas/qquota/qquota.xsd
+sge/util/resources/schemas/qrstat/qrstat.xsd
sge/util/resources/schemas/qstat/detailed_job_info.xsd
sge/util/resources/schemas/qstat/message.xsd
sge/util/resources/schemas/qstat/qstat.xsd
sge/util/resources/starter_methods/settaskid.sh
+sge/util/resources/usersets/arusers
sge/util/resources/usersets/deadlineusers
sge/util/resources/usersets/defaultdepartment
+sge/util/rmiconsole.policy
sge/util/setfileperm.sh
sge/util/setfileperm.sh.orig
sge/util/sgeCA/renew_all_certs.csh
@@ -578,9 +608,20 @@
sge/util/sgeCA/sge_ca.cnf
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