CVS commit: pkgsrc/biology/gromacs

["Aleksej Saushev" <asau%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   asau
Date:           Wed Mar 23 05:36:29 UTC 2011

Modified Files:
        pkgsrc/biology/gromacs: Makefile PLIST distinfo

Log Message:
Update to Gromacs 4.5.4:

* Fixed pdb2gmx picking up force field from local instead of
library directory
* Made pdb2gmx vsite generation work again for certain His namings.
* Fixed incorrect virial and pressure averages with certain
nst... values (instantaneous values correct)
* Fixed incorrect cosine viscosity output
* New -multidir alternative for mdrun -multi option
* Several minor fixes in analysis tools
* Several updates to the program documentation


To generate a diff of this commit:
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/gromacs/Makefile
cvs rdiff -u -r1.5 -r1.6 pkgsrc/biology/gromacs/PLIST
cvs rdiff -u -r1.7 -r1.8 pkgsrc/biology/gromacs/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.