CVS commit: pkgsrc/biology/plinkseq

["Roland Illig" <rillig%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   rillig
Date:           Sat Dec 17 12:55:29 UTC 2016

Modified Files:
        pkgsrc/biology/plinkseq: Makefile distinfo
        pkgsrc/biology/plinkseq/patches: patch-browser_mongoose.c

Log Message:
Fixed pkglint warnings.


To generate a diff of this commit:
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/plinkseq/Makefile
cvs rdiff -u -r1.4 -r1.5 pkgsrc/biology/plinkseq/distinfo
cvs rdiff -u -r1.2 -r1.3 \
    pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/plinkseq/Makefile
diff -u pkgsrc/biology/plinkseq/Makefile:1.3 pkgsrc/biology/plinkseq/Makefile:1.4
--- pkgsrc/biology/plinkseq/Makefile:1.3        Sat Feb  8 12:27:14 2014
+++ pkgsrc/biology/plinkseq/Makefile    Sat Dec 17 12:55:29 2016
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.3 2014/02/08 12:27:14 wiedi Exp $
+# $NetBSD: Makefile,v 1.4 2016/12/17 12:55:29 rillig Exp $
 
 DISTNAME=      plinkseq-0.08
 PKGREVISION=   1
@@ -20,19 +20,19 @@ LDFLAGS.SunOS+=     -lsocket -lnsl
 
 .include "../../mk/bsd.prefs.mk"
 
-.if $(OPSYS) != "Linux"
+.if ${OPSYS} != "Linux"
 BUILDLINK_TRANSFORM=   rm:-ldl
 .endif
 
 # Put missing protocol description files in place:
 post-extract:
-       $(CP) $(FILESDIR)/pp.proto $(WRKSRC)/lib/
-       $(CP) $(FILESDIR)/variant.proto $(WRKSRC)/lib/
+       ${CP} ${FILESDIR}/pp.proto ${WRKSRC}/lib/
+       ${CP} ${FILESDIR}/variant.proto ${WRKSRC}/lib/
 
 # Regenerate:
 pre-build:
-       cd $(WRKSRC)/lib && protoc --cpp_out=. pp.proto && mv pp.pb.cc pp.pb.cpp
-       cd $(WRKSRC)/lib && protoc --cpp_out=. variant.proto && mv variant.pb.cc variant.pb.cpp
+       cd ${WRKSRC}/lib && protoc --cpp_out=. pp.proto && mv pp.pb.cc pp.pb.cpp
+       cd ${WRKSRC}/lib && protoc --cpp_out=. variant.proto && mv variant.pb.cc variant.pb.cpp
 
 .include "../../devel/protobuf/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"

Index: pkgsrc/biology/plinkseq/distinfo
diff -u pkgsrc/biology/plinkseq/distinfo:1.4 pkgsrc/biology/plinkseq/distinfo:1.5
--- pkgsrc/biology/plinkseq/distinfo:1.4        Mon Nov  2 18:42:22 2015
+++ pkgsrc/biology/plinkseq/distinfo    Sat Dec 17 12:55:29 2016
@@ -1,11 +1,11 @@
-$NetBSD: distinfo,v 1.4 2015/11/02 18:42:22 agc Exp $
+$NetBSD: distinfo,v 1.5 2016/12/17 12:55:29 rillig Exp $
 
 SHA1 (plinkseq-0.08.tar.gz) = 8bff6b32750eee85559dda2c7c3cf9aea423a3d7
 RMD160 (plinkseq-0.08.tar.gz) = bce0966ea5f25d8c1091157561aaf533a98595ec
 SHA512 (plinkseq-0.08.tar.gz) = c82db774df26988f9af377d5493cf579bbf1a219b43987f74381f795ade2340dd486c8d7d629612fd6068a023ea605540f2c972bf7fb71d665730262ef94cb80
 Size (plinkseq-0.08.tar.gz) = 2991871 bytes
 SHA1 (patch-browser_main.c) = 2bbeed764180b0a0e30f134b40c650cfa20bdcec
-SHA1 (patch-browser_mongoose.c) = 02233e0dd1f4c7923ffabf1a16b30c374253d87e
+SHA1 (patch-browser_mongoose.c) = 02716eb71171edd37ae483d98a045c261e65defe
 SHA1 (patch-lib_annot.cpp) = b405bca26186ea08241ad5936c2a1b43212d8dec
 SHA1 (patch-lib_annot.h) = 5efccddf878b4628ae7186d59a726a157d356196
 SHA1 (patch-lib_token.cpp) = 848e7b790db6a4784697482ea330b4d474731368

Index: pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c
diff -u pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c:1.2 pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c:1.3
--- pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c:1.2        Thu Apr 17 21:23:19 2014
+++ pkgsrc/biology/plinkseq/patches/patch-browser_mongoose.c    Sat Dec 17 12:55:29 2016
@@ -1,4 +1,4 @@
-$NetBSD: patch-browser_mongoose.c,v 1.2 2014/04/17 21:23:19 asau Exp $
+$NetBSD: patch-browser_mongoose.c,v 1.3 2016/12/17 12:55:29 rillig Exp $
 
 __BSD_VISIBLE is needed on FreeBSD.
 _XOPEN_SOURCE is not needed on sunos.
@@ -16,7 +16,7 @@ _XOPEN_SOURCE is not needed on sunos.
  #define _LARGEFILE_SOURCE // Enable 64-bit file offsets
  #define __STDC_FORMAT_MACROS // <inttypes.h> wants this for C++
  #endif
-@@ -213,6 +216,10 @@ typedef int SOCKET;
+@@ -213,6 +216,10 @@ typedef int SOCKET;
  
  #endif // End of Windows and UNIX specific includes