CVS commit: pkgsrc/biology/bwa

["Joerg Sonnenberger" <joerg%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   joerg
Date:           Tue Feb 14 21:34:34 UTC 2017

Modified Files:
        pkgsrc/biology/bwa: distinfo
Added Files:
        pkgsrc/biology/bwa/patches: patch-kopen.c

Log Message:
Add missing include.


To generate a diff of this commit:
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/bwa/distinfo
cvs rdiff -u -r0 -r1.1 pkgsrc/biology/bwa/patches/patch-kopen.c

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/bwa/distinfo
diff -u pkgsrc/biology/bwa/distinfo:1.3 pkgsrc/biology/bwa/distinfo:1.4
--- pkgsrc/biology/bwa/distinfo:1.3     Sat Dec 12 16:56:04 2015
+++ pkgsrc/biology/bwa/distinfo Tue Feb 14 21:34:34 2017
@@ -1,7 +1,8 @@
-$NetBSD: distinfo,v 1.3 2015/12/12 16:56:04 wiedi Exp $
+$NetBSD: distinfo,v 1.4 2017/02/14 21:34:34 joerg Exp $
 
 SHA1 (bwa-0.7.9a.tar.bz2) = a77ce327e8acba554b1d27bfdd1c148f79726484
 RMD160 (bwa-0.7.9a.tar.bz2) = a51b7c686a206144eab2aee0a372d5ae46fcfce1
 SHA512 (bwa-0.7.9a.tar.bz2) = 93804b2c0ac0f675e76f762441e1eec039d7f1cf77b033fd88f2e6c39d9cd4b5c21bba9fb44e34a3dab28c630c3855792a707e5b33109d4be0097cec97eaa686
 Size (bwa-0.7.9a.tar.bz2) = 166193 bytes
 SHA1 (patch-Makefile) = 2bb665cb579d20a07ae7c2be8ba0ed874d60d5b0
+SHA1 (patch-kopen.c) = 9c92b812a7e55bf9d7d136d91be02982610d9f51

Added files:

Index: pkgsrc/biology/bwa/patches/patch-kopen.c
diff -u /dev/null pkgsrc/biology/bwa/patches/patch-kopen.c:1.1
--- /dev/null   Tue Feb 14 21:34:34 2017
+++ pkgsrc/biology/bwa/patches/patch-kopen.c    Tue Feb 14 21:34:34 2017
@@ -0,0 +1,12 @@
+$NetBSD: patch-kopen.c,v 1.1 2017/02/14 21:34:34 joerg Exp $
+
+--- kopen.c.orig       2017-02-09 15:42:47.246248867 +0000
++++ kopen.c
+@@ -8,6 +8,7 @@
+ #include <signal.h>
+ #include <sys/wait.h>
+ #include <sys/types.h>
++#include <sys/time.h>
+ #ifndef _WIN32
+ #include <netdb.h>
+ #include <arpa/inet.h>