CVS commit: [pkgsrc-2017Q2] pkgsrc/databases

To: pkgsrc-changes%NetBSD.org@localhost
Subject: CVS commit: [pkgsrc-2017Q2] pkgsrc/databases
From: "S.P.Zeidler" <spz%netbsd.org@localhost>
Date: Sat, 29 Jul 2017 13:56:01 +0000

Module Name:    pkgsrc
Committed By:   spz
Date:           Sat Jul 29 13:56:01 UTC 2017

Modified Files:
        pkgsrc/databases/mysql55-client [pkgsrc-2017Q2]: Makefile
            Makefile.common distinfo
        pkgsrc/databases/mysql55-server [pkgsrc-2017Q2]: Makefile PLIST

Log Message:
Pullup ticket #5524 - requested by taca
databases/mysql55-client: security update
databases/mysql55-server: security update

Revisions pulled up:
- databases/mysql55-client/Makefile                             1.29
- databases/mysql55-client/Makefile.common                      1.60
- databases/mysql55-client/distinfo                             1.59
- databases/mysql55-server/Makefile                             1.33
- databases/mysql55-server/PLIST                                1.47

-------------------------------------------------------------------
   Module Name: pkgsrc
   Committed By:        adam
   Date:                Wed Jul 19 18:48:22 UTC 2017

   Modified Files:
        pkgsrc/databases/mysql55-client: Makefile Makefile.common distinfo
        pkgsrc/databases/mysql55-server: Makefile PLIST
        pkgsrc/databases/mysql56-client: Makefile Makefile.common distinfo
        pkgsrc/databases/mysql56-server: Makefile PLIST

   Log Message:
   Security Notes
   * Security Fix: The linked OpenSSL library for the MySQL Commercial Server has been updated to version 1.0.2l. Issues fixed in the new OpenSSL version are described at 
http://www.openssl.org/news/vulnerabilities.html.
     This change does not affect the Oracle-produced MySQL Community build of MySQL Server, which uses the yaSSL library instead.

   Platform-Specific Notes
   * Linux: The generic Linux build for MySQL 5.6 is now built on Oracle Linux 6 using glibc 2.12. Systems that use the build need to have glibc 2.12 or later installed on them.

   Functionality Added or Changed
   * For Windows, MSI installer packages now include a check for the required Visual Studio redistributable package, and produce a message asking the user to install it if it is missing.
   * The mysql client now supports a --binary-as-hex option that causes display of binary data using hexadecimal notation (0xvalue). Thanks to Dani�l van Eeden for the patch.
   * mysqlaccess now looks for its configuration file only in the SYSCONFDIR directory and /etc.

   Bugs Fixed
   * InnoDB: The server allocated memory unnecessarily for an operation that rebuilt the table.
   * InnoDB: When using an index merge optimizer switch, a SELECT COUNT(*) operation sometimes returned 0. Partitioning code incorrectly performed a memcpy instead of a column copy of columns read by 
the index, causing the wrong records to be copied.
   * Replication: A USE statement that followed a SET GTID_NEXT statement sometimes had no effect.
   * Replication: If the binary log on a master server was rotated and a full disk condition occurred on the partition where the binary log file was being stored, the server could stop unexpectedly. 
The fix adds a check for the existence of the binary log when the dump thread switches to next binary log file. If the binary log is disabled, all binary logs up to the current active log are 
transmitted to slave and an error is returned to the receiver thread.
   * Replication: If a relay log index file named relay log files that did not exist, RESET SLAVE ALL sometimes did not fully clean up properly.
   * Replication: mysqlbinlog, if invoked with the --raw option, does not flush the output file until the process terminates. But if also invoked with the --stop-never option, the process never 
terminates, thus nothing is ever written to the output file. Now the output is flushed after each event.
   * Replication: A memory leak in mysqlbinlog was fixed. The leak happened when processing fake rotate events, or when using --raw and the destination log file could not be created. The leak only 
occurred when processing events from a remote server. Thanks to Laurynas Biveinis for his contribution to fixing this bug.
   * Replication: Multi-threaded slaves could not be configured with small queue sizes using slave_pending_jobs_size_max if they ever needed to process transactions larger than that size. Any packet 
larger than slave_pending_jobs_size_max was rejected with the error ER_MTS_EVENT_BIGGER_PENDING_JOBS_SIZE_MAX, even if the packet was smaller than the limit set by slave_max_allowed_packet.
   * With this fix, slave_pending_jobs_size_max becomes a soft limit rather than a hard limit. If the size of a packet exceeds slave_pending_jobs_size_max but is less than slave_max_allowed_packet, 
the transaction is held until all the slave workers have empty queues, and then processed. All subsequent transactions are held until the large transaction has been completed. The queue size for 
slave workers can therefore be limited while still allowing occasional larger transactions.
   * mysqldump could write database names in USE statements incorrectly.
   * If the mysql_stmt_close() C API function was called, it freed memory that later could be accessed if mysql_stmt_error(), mysql_stmt_errno(), or mysql_stmt_sqlstate() was called. To obtain error 
information after a call to mysql_stmt_close(), call mysql_error(), mysql_errno(), or mysql_sqlstate() instead.
   * Queries could be cached incorrectly, leading to incorrect query results, under these circumstances: InnoDB table; rows are being inserted but have not yet been committed; a query uses the table 
as a base table in a derived table; the optimizer chooses to materialize the derived table.
   * Man pages for a few utilities were missing from Debian/Ubuntu packages.
   * The field-t unit test failed to run with AddressSanitizer enabled. Thanks to Laurynas Biveinis for the patch.
   * Debian client packages were missing information about conflicts with native packages.
   * The Perl path in #! lines at the beginning of Perl scripts has been adjusted to /usr/local/bin/perl for FreeBSD 11.
   * The server exited abnormally attempting to access invalid memory.
   * A race condition could occur for CREATE TABLE statements with DATA DIRECTORY or INDEX DIRECTORY clauses.
   * MySQL compilation in different directories produced different builds to leakage of absolute paths into debug information and __FILE__.
   * mysqld_failed to start the server if the --datadir option was specified with a relative path name.
   * With read_only enabled, creation of non-TEMPORARY tables by non-SUPER users was permitted under certain conditions.
   *Certain stored functions, if used in a query WHERE clause, could be handled using Index Condition Pushdown (which should not happen), resulting in a server exit.
   * On x86 machines, the uint3korr() macro read 4 bytes of data instead of the intended 3 bytes.
   * An assertion was raised during a fetch operation by the memcached plugin.
   * Queries that contained UNION in a subquery and GROUP BY could return incorrect results.
   * LOAD XML INFILE performance became noticeably slower when the XML file being read contained a great many spaces, such as those introduced by indenting or pretty-printing. Now all leading 
whitespace is trimmed from each such value before reading it into memory.

   To generate a diff of this commit:
   cvs rdiff -u -r1.28 -r1.29 pkgsrc/databases/mysql55-client/Makefile
   cvs rdiff -u -r1.59 -r1.60 pkgsrc/databases/mysql55-client/Makefile.common
   cvs rdiff -u -r1.58 -r1.59 pkgsrc/databases/mysql55-client/distinfo
   cvs rdiff -u -r1.32 -r1.33 pkgsrc/databases/mysql55-server/Makefile
   cvs rdiff -u -r1.46 -r1.47 pkgsrc/databases/mysql55-server/PLIST


To generate a diff of this commit:
cvs rdiff -u -r1.28 -r1.28.2.1 pkgsrc/databases/mysql55-client/Makefile
cvs rdiff -u -r1.59 -r1.59.2.1 \
    pkgsrc/databases/mysql55-client/Makefile.common
cvs rdiff -u -r1.58 -r1.58.2.1 pkgsrc/databases/mysql55-client/distinfo
cvs rdiff -u -r1.32 -r1.32.2.1 pkgsrc/databases/mysql55-server/Makefile
cvs rdiff -u -r1.46 -r1.46.6.1 pkgsrc/databases/mysql55-server/PLIST

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/databases/mysql55-client/Makefile
diff -u pkgsrc/databases/mysql55-client/Makefile:1.28 pkgsrc/databases/mysql55-client/Makefile:1.28.2.1
--- pkgsrc/databases/mysql55-client/Makefile:1.28       Mon Jun 19 12:07:50 2017
+++ pkgsrc/databases/mysql55-client/Makefile    Sat Jul 29 13:56:01 2017
@@ -1,7 +1,6 @@
-# $NetBSD: Makefile,v 1.28 2017/06/19 12:07:50 jperkin Exp $
+# $NetBSD: Makefile,v 1.28.2.1 2017/07/29 13:56:01 spz Exp $
 
 PKGNAME=       ${DISTNAME:S/-/-client-/}
-PKGREVISION=   1
 COMMENT=       MySQL 5, a free SQL database (client)
 
 CONFLICTS=     mysql3-client-[0-9]*
@@ -14,15 +13,19 @@ UNWRAP_FILES+=              scripts/mysql_config
 INFO_FILES=            yes
 INSTALL_DIRS+=         client include libmysql man scripts tests
 
-REPLACE_PERL=  scripts/mysql_convert_table_format.sh
-REPLACE_PERL+= scripts/mysql_find_rows.sh
-REPLACE_PERL+= scripts/mysql_fix_extensions.sh
-REPLACE_PERL+= scripts/mysql_setpermission.sh
-REPLACE_PERL+= scripts/mysql_zap.sh
-REPLACE_PERL+= scripts/mysqlaccess.sh
-REPLACE_PERL+= scripts/mysqld_multi.sh
-REPLACE_PERL+= scripts/mysqldumpslow.sh
-REPLACE_PERL+= scripts/mysqlhotcopy.sh
+SUBST_CLASSES+=                perlpath
+SUBST_STAGE.perlpath=  pre-configure
+SUBST_MESSAGE.perlpath=        Fixing Perl paths.
+SUBST_FILES.perlpath=  scripts/mysql_convert_table_format.sh
+SUBST_FILES.perlpath+= scripts/mysql_find_rows.sh
+SUBST_FILES.perlpath+= scripts/mysql_fix_extensions.sh
+SUBST_FILES.perlpath+= scripts/mysql_setpermission.sh
+SUBST_FILES.perlpath+= scripts/mysql_zap.sh
+SUBST_FILES.perlpath+= scripts/mysqlaccess.sh
+SUBST_FILES.perlpath+= scripts/mysqld_multi.sh
+SUBST_FILES.perlpath+= scripts/mysqldumpslow.sh
+SUBST_FILES.perlpath+= scripts/mysqlhotcopy.sh
+SUBST_SED.perlpath=    -e 's,@PERL_PATH@,${PERL5},g'
 
 SUBST_CLASSES+=                fixwrap
 SUBST_STAGE.fixwrap=   post-build

Index: pkgsrc/databases/mysql55-client/Makefile.common
diff -u pkgsrc/databases/mysql55-client/Makefile.common:1.59 pkgsrc/databases/mysql55-client/Makefile.common:1.59.2.1
--- pkgsrc/databases/mysql55-client/Makefile.common:1.59        Fri May  5 16:22:29 2017
+++ pkgsrc/databases/mysql55-client/Makefile.common     Sat Jul 29 13:56:01 2017
@@ -1,9 +1,9 @@
-# $NetBSD: Makefile.common,v 1.59 2017/05/05 16:22:29 jperkin Exp $
+# $NetBSD: Makefile.common,v 1.59.2.1 2017/07/29 13:56:01 spz Exp $
 #
 # used by databases/mysql55-client/Makefile
 # used by databases/mysql55-server/Makefile
 
-DISTNAME=      mysql-5.5.56
+DISTNAME=      mysql-5.5.57
 CATEGORIES=    databases
 MASTER_SITES=  ${MASTER_SITE_MYSQL:=MySQL-5.5/}
 
@@ -110,11 +110,13 @@ LDFLAGS+=         ${COMPILER_RPATH_FLAG}${PREFI
 
 SUBST_CLASSES+=                scr
 SUBST_STAGE.scr=       pre-configure
-SUBST_FILES.scr=       scripts/mysql_install_db.sh scripts/mysqld_safe.sh \
-                       scripts/mysql_secure_installation.sh \
-                       support-files/mysql.server.sh
+SUBST_FILES.scr=       scripts/mysql_install_db.sh
+SUBST_FILES.scr+=      scripts/mysql_secure_installation.sh
+SUBST_FILES.scr+=      scripts/mysqld_safe.sh
+SUBST_FILES.scr+=      support-files/mysql.server.sh
 SUBST_SED.scr=         -e "s,chown,${CHOWN},g"
 SUBST_SED.scr+=                -e "s,/bin/sh,${RCD_SCRIPTS_SHELL},g"
+SUBST_SED.scr+=                -e "s,@SHELL_PATH@,${RCD_SCRIPTS_SHELL},g"
 SUBST_MESSAGE.scr=     Fixing scripts.
 
 SUBST_CLASSES+=                fixpaths

Index: pkgsrc/databases/mysql55-client/distinfo
diff -u pkgsrc/databases/mysql55-client/distinfo:1.58 pkgsrc/databases/mysql55-client/distinfo:1.58.2.1
--- pkgsrc/databases/mysql55-client/distinfo:1.58       Mon Jun 19 12:07:50 2017
+++ pkgsrc/databases/mysql55-client/distinfo    Sat Jul 29 13:56:01 2017
@@ -1,9 +1,9 @@
-$NetBSD: distinfo,v 1.58 2017/06/19 12:07:50 jperkin Exp $
+$NetBSD: distinfo,v 1.58.2.1 2017/07/29 13:56:01 spz Exp $
 
-SHA1 (mysql-5.5.56.tar.gz) = e8005b7612aa65bd11fc1e2f8bc11dad3f46ac39
-RMD160 (mysql-5.5.56.tar.gz) = 9ef621da171dcbe020dbb3f685b39ce89f47c4bb
-SHA512 (mysql-5.5.56.tar.gz) = 58aec4cfc82abac5bb9d5e5594d2545c979910af5b7bbcfe339f9590d157244c869a83659f89a2cca09254353ecb52d2dcb3e2cd55e117219e2a72c54187a975
-Size (mysql-5.5.56.tar.gz) = 21025832 bytes
+SHA1 (mysql-5.5.57.tar.gz) = 4652b6bbc6b0dbb763ffa778c29e8cb4ea6a9f7f
+RMD160 (mysql-5.5.57.tar.gz) = 230e9f80e616f763c6012bee82f52e3ffe77a9ed
+SHA512 (mysql-5.5.57.tar.gz) = 493e6345a2d8ec407fcfc6ed5b67599c77b6351b7cfb1d676b39f68ac9446959cf0822c0d0bcd2206cea07b8c06c85734aa8501c938d6393ffab220f3f5ee6e8
+Size (mysql-5.5.57.tar.gz) = 21044615 bytes
 SHA1 (sphinx-2.2.11-release.tar.gz) = 34e83f43de0e69e258bf749ea00348c60a51632a
 RMD160 (sphinx-2.2.11-release.tar.gz) = 5804b4cce64bc03fa20bac26c7391cd661cecc77
 SHA512 (sphinx-2.2.11-release.tar.gz) = cf1a262a5b0fbf0bd2827ec6ec629edeaf709ce855a6e7b509b65342baaeb26c02717ca63f1578d32c83d21e2fd6d1e92dceb34660e6351b93cd96fd4e623689

Index: pkgsrc/databases/mysql55-server/Makefile
diff -u pkgsrc/databases/mysql55-server/Makefile:1.32 pkgsrc/databases/mysql55-server/Makefile:1.32.2.1
--- pkgsrc/databases/mysql55-server/Makefile:1.32       Sat Jun 24 15:18:42 2017
+++ pkgsrc/databases/mysql55-server/Makefile    Sat Jul 29 13:56:01 2017
@@ -1,7 +1,6 @@
-# $NetBSD: Makefile,v 1.32 2017/06/24 15:18:42 schmonz Exp $
+# $NetBSD: Makefile,v 1.32.2.1 2017/07/29 13:56:01 spz Exp $
 
 PKGNAME=       ${DISTNAME:S/-/-server-/}
-PKGREVISION=   1
 COMMENT=       MySQL 5, a free SQL database (server)
 
 CONFLICTS=     mysql3-server-[0-9]*

Index: pkgsrc/databases/mysql55-server/PLIST
diff -u pkgsrc/databases/mysql55-server/PLIST:1.46 pkgsrc/databases/mysql55-server/PLIST:1.46.6.1
--- pkgsrc/databases/mysql55-server/PLIST:1.46  Mon Dec 12 19:22:57 2016
+++ pkgsrc/databases/mysql55-server/PLIST       Sat Jul 29 13:56:01 2017
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.46 2016/12/12 19:22:57 adam Exp $
+@comment $NetBSD: PLIST,v 1.46.6.1 2017/07/29 13:56:01 spz Exp $
 bin/innochecksum
 bin/my_print_defaults
 bin/myisam_ftdump
@@ -677,6 +677,7 @@ share/mysql/test/r/bench_count_distinct.
 share/mysql/test/r/big_test.require
 share/mysql/test/r/bigint.result
 share/mysql/test/r/binary.result
+share/mysql/test/r/binary_to_hex.result
 share/mysql/test/r/binlog_tx_isolation.result
 share/mysql/test/r/blackhole.result
 share/mysql/test/r/blackhole_plugin.result
@@ -4051,6 +4052,7 @@ share/mysql/test/suite/rpl/r/rpl_replica
 share/mysql/test/suite/rpl/r/rpl_replicate_ignore_db.result
 share/mysql/test/suite/rpl/r/rpl_report.result
 share/mysql/test/suite/rpl/r/rpl_report_port.result
+share/mysql/test/suite/rpl/r/rpl_reset_slave_fail.result
 share/mysql/test/suite/rpl/r/rpl_rewrt_db.result
 share/mysql/test/suite/rpl/r/rpl_rotate_logs.result
 share/mysql/test/suite/rpl/r/rpl_rotate_purge_deadlock.result
@@ -4430,6 +4432,7 @@ share/mysql/test/suite/rpl/t/rpl_report-
 share/mysql/test/suite/rpl/t/rpl_report.test
 share/mysql/test/suite/rpl/t/rpl_report_port-master.opt
 share/mysql/test/suite/rpl/t/rpl_report_port.test
+share/mysql/test/suite/rpl/t/rpl_reset_slave_fail.test
 share/mysql/test/suite/rpl/t/rpl_rewrt_db-slave.opt
 share/mysql/test/suite/rpl/t/rpl_rewrt_db.test
 share/mysql/test/suite/rpl/t/rpl_rotate_logs.cnf
@@ -5670,6 +5673,7 @@ share/mysql/test/t/auto_increment.test
 share/mysql/test/t/bench_count_distinct.test
 share/mysql/test/t/bigint.test
 share/mysql/test/t/binary.test
+share/mysql/test/t/binary_to_hex.test
 share/mysql/test/t/blackhole.test
 share/mysql/test/t/blackhole_plugin-master.opt
 share/mysql/test/t/blackhole_plugin.test

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