CVS commit: pkgsrc/math/py-rpy

["Adam Ciarcinski" <adam%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   adam
Date:           Tue Nov 28 09:07:23 UTC 2017

Modified Files:
        pkgsrc/math/py-rpy: Makefile PLIST distinfo

Log Message:
py-rpy: updated to 2.9.1

Release 2.9.1

Changes
-------
- Fixing issue 432 (see Section Bugs fixed below) involved removed the method
  `__reduce__` previously provided for all rpy2 objects representing R objects.

Bugs fixed
----------
- An error when installing with an unsupported R version was fixed.
- The docstring for `rinterface.endr()` was improperly stating that the function was not taking
  any argument.
- Target version of dplyr and tidyr are now 0.7.4 and 0.7.2 respectively.
- Fixed memory leak when pickling objects. Fixing the leak caused a
  slight change in the API (see Section Changes above).
- Conversion to :mod:`pandas` now handling R ordered factor.
- :mod:`jinja2` was not listed as a dependency


To generate a diff of this commit:
cvs rdiff -u -r1.42 -r1.43 pkgsrc/math/py-rpy/Makefile
cvs rdiff -u -r1.17 -r1.18 pkgsrc/math/py-rpy/PLIST
cvs rdiff -u -r1.14 -r1.15 pkgsrc/math/py-rpy/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/py-rpy/Makefile
diff -u pkgsrc/math/py-rpy/Makefile:1.42 pkgsrc/math/py-rpy/Makefile:1.43
--- pkgsrc/math/py-rpy/Makefile:1.42    Wed Oct 18 16:17:12 2017
+++ pkgsrc/math/py-rpy/Makefile Tue Nov 28 09:07:23 2017
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.42 2017/10/18 16:17:12 adam Exp $
+# $NetBSD: Makefile,v 1.43 2017/11/28 09:07:23 adam Exp $
 
-DISTNAME=      rpy2-2.9.0
+DISTNAME=      rpy2-2.9.1
 PKGNAME=       ${PYPKGPREFIX}-${DISTNAME:S/rpy2/rpy/}
 CATEGORIES=    math python
 MASTER_SITES=  ${MASTER_SITE_PYPI:=r/rpy2/}
@@ -10,6 +10,7 @@ HOMEPAGE=     http://rpy.sourceforge.net/
 COMMENT=       R interface for Python
 LICENSE=       mpl-1.1 OR gnu-gpl-v2 OR gnu-lgpl-v2.1
 
+DEPENDS+=      ${PYPKGPREFIX}-jinja2-[0-9]*:../../textproc/py-jinja2
 DEPENDS+=      ${PYPKGPREFIX}-six-[0-9]*:../../lang/py-six
 DEPENDS+=      ${PYPKGPREFIX}-sqlite3-[0-9]*:../../databases/py-sqlite3
 
@@ -26,7 +27,7 @@ PYTHON_VERSIONS_INCOMPATIBLE= 27
 .include "../../devel/pcre/buildlink3.mk"
 .include "../../lang/python/application.mk"
 .include "../../lang/python/egg.mk"
-.include "../../math/py-numpy/buildlink3.mk"
 .include "../../math/R/buildlink3.mk"
+.include "../../math/py-numpy/buildlink3.mk"
 .include "../../mk/readline.buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"

Index: pkgsrc/math/py-rpy/PLIST
diff -u pkgsrc/math/py-rpy/PLIST:1.17 pkgsrc/math/py-rpy/PLIST:1.18
--- pkgsrc/math/py-rpy/PLIST:1.17       Wed Oct 18 16:17:12 2017
+++ pkgsrc/math/py-rpy/PLIST    Tue Nov 28 09:07:23 2017
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.17 2017/10/18 16:17:12 adam Exp $
+@comment $NetBSD: PLIST,v 1.18 2017/11/28 09:07:23 adam Exp $
 ${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
 ${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
 ${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
@@ -120,9 +120,6 @@ ${PYSITELIB}/rpy2/robjects/language.pyo
 ${PYSITELIB}/rpy2/robjects/lib/__init__.py
 ${PYSITELIB}/rpy2/robjects/lib/__init__.pyc
 ${PYSITELIB}/rpy2/robjects/lib/__init__.pyo
-${PYSITELIB}/rpy2/robjects/lib/dbplyr.py
-${PYSITELIB}/rpy2/robjects/lib/dbplyr.pyc
-${PYSITELIB}/rpy2/robjects/lib/dbplyr.pyo
 ${PYSITELIB}/rpy2/robjects/lib/dplyr.py
 ${PYSITELIB}/rpy2/robjects/lib/dplyr.pyc
 ${PYSITELIB}/rpy2/robjects/lib/dplyr.pyo

Index: pkgsrc/math/py-rpy/distinfo
diff -u pkgsrc/math/py-rpy/distinfo:1.14 pkgsrc/math/py-rpy/distinfo:1.15
--- pkgsrc/math/py-rpy/distinfo:1.14    Wed Oct 18 16:17:12 2017
+++ pkgsrc/math/py-rpy/distinfo Tue Nov 28 09:07:23 2017
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.14 2017/10/18 16:17:12 adam Exp $
+$NetBSD: distinfo,v 1.15 2017/11/28 09:07:23 adam Exp $
 
-SHA1 (rpy2-2.9.0.tar.gz) = 6ebe536f24a3a171b939e5a4fe62577a15fe48b5
-RMD160 (rpy2-2.9.0.tar.gz) = 94f55b341b47f2a29e785c72a0596ef6014b7cf2
-SHA512 (rpy2-2.9.0.tar.gz) = 55be876fb7316a08f507f3a332ed29d71b52f733c1986482f141e694d66d0e01a51a9c3f0260f6fe0086d7bfbc1f58b678cda4570665e4f1ffdb120c793ef1b2
-Size (rpy2-2.9.0.tar.gz) = 193062 bytes
+SHA1 (rpy2-2.9.1.tar.gz) = 17aaa58ac59430e40c86db8796794f9da0dd4c2d
+RMD160 (rpy2-2.9.1.tar.gz) = 43251a017d6000e7e2d2d473cf10f683e14ea006
+SHA512 (rpy2-2.9.1.tar.gz) = 47a9a5a8b3ed9b891fb1d906d774896584e8bc911917e790d926530555d3f431cc517df6ac7b00ecd0b9197b7e4d0c34295969d37ef1b009d25ca07fcfd31e9d
+Size (rpy2-2.9.1.tar.gz) = 192897 bytes