CVS commit: pkgsrc/math/R-RNetCDF

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sun Sep 19 02:55:21 UTC 2021

Modified Files:
        pkgsrc/math/R-RNetCDF: Makefile distinfo
        pkgsrc/math/R-RNetCDF/patches: patch-configure

Log Message:
(math/R-RNetCDF) Updated 2.4.2 to 2.5.2

Version 2.5-2, 2021-08-20
  * Support hdf5 filters via multi-filter interface (netcdf>=4.8.0)
  * Windows: update binary packages to netcdf 4.7.4 with OpenDAP
  * Generate type conversions with m4 macros
  * Reduce CPU time for utcal.nc example to pass CRAN checks


To generate a diff of this commit:
cvs rdiff -u -r1.14 -r1.15 pkgsrc/math/R-RNetCDF/Makefile
cvs rdiff -u -r1.2 -r1.3 pkgsrc/math/R-RNetCDF/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/math/R-RNetCDF/patches/patch-configure

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-RNetCDF/Makefile
diff -u pkgsrc/math/R-RNetCDF/Makefile:1.14 pkgsrc/math/R-RNetCDF/Makefile:1.15
--- pkgsrc/math/R-RNetCDF/Makefile:1.14 Wed Apr 21 13:24:59 2021
+++ pkgsrc/math/R-RNetCDF/Makefile      Sun Sep 19 02:55:21 2021
@@ -1,14 +1,13 @@
-# $NetBSD: Makefile,v 1.14 2021/04/21 13:24:59 adam Exp $
+# $NetBSD: Makefile,v 1.15 2021/09/19 02:55:21 mef Exp $
 
 R_PKGNAME=     RNetCDF
-R_PKGVER=      2.4-2
+R_PKGVER=      2.5-2
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Interface to NetCDF datasets
-PKGREVISION=   1
 LICENSE=       gnu-gpl-v2 OR gnu-gpl-v3        # OR file LICENSE
 
-USE_LANGUAGES= c
+TEST_DEPENDS+= R-bit64-[0-9]*:../../devel/R-bit64
 
 .include "../../math/R/Makefile.extension"
 .include "../../devel/netcdf/buildlink3.mk"

Index: pkgsrc/math/R-RNetCDF/distinfo
diff -u pkgsrc/math/R-RNetCDF/distinfo:1.2 pkgsrc/math/R-RNetCDF/distinfo:1.3
--- pkgsrc/math/R-RNetCDF/distinfo:1.2  Sun Sep 20 23:12:14 2020
+++ pkgsrc/math/R-RNetCDF/distinfo      Sun Sep 19 02:55:21 2021
@@ -1,7 +1,7 @@
-$NetBSD: distinfo,v 1.2 2020/09/20 23:12:14 mef Exp $
+$NetBSD: distinfo,v 1.3 2021/09/19 02:55:21 mef Exp $
 
-SHA1 (R/RNetCDF_2.4-2.tar.gz) = fd68dd7e1b5dc789e8d313ff9593cf56a8075ca0
-RMD160 (R/RNetCDF_2.4-2.tar.gz) = 8ff7615c3a43d83218914e9139a5bf00d9ad6c14
-SHA512 (R/RNetCDF_2.4-2.tar.gz) = afd314dd0a5735ccad3579c9b9091956e7277cf8e630016264f5adef9f31831c79d85b53459e160f09e37789b3518f3cb184a100036af082abfb0533b906e1a6
-Size (R/RNetCDF_2.4-2.tar.gz) = 124926 bytes
-SHA1 (patch-configure) = 0ff9f35b4c2ca1701c381be9f6761fd62fa33e39
+SHA1 (R/RNetCDF_2.5-2.tar.gz) = d774b638f4ed2369151a49a381462cc1f5c7b9c3
+RMD160 (R/RNetCDF_2.5-2.tar.gz) = 9ba42433793f0cce837aa4c66ee618c7a6ab2cae
+SHA512 (R/RNetCDF_2.5-2.tar.gz) = d12f5e96352f6ae9726a2b1f288db036a6addf2f66abc876773cfefb35e1a9cd1ff62991cec62877e00384f1687c24d905f31300f9a6d477b0f367daed24b97c
+Size (R/RNetCDF_2.5-2.tar.gz) = 143675 bytes
+SHA1 (patch-configure) = b8309c6e26be3039e8d86482979f031887abd123

Index: pkgsrc/math/R-RNetCDF/patches/patch-configure
diff -u pkgsrc/math/R-RNetCDF/patches/patch-configure:1.2 pkgsrc/math/R-RNetCDF/patches/patch-configure:1.3
--- pkgsrc/math/R-RNetCDF/patches/patch-configure:1.2   Sun Sep 20 23:12:15 2020
+++ pkgsrc/math/R-RNetCDF/patches/patch-configure       Sun Sep 19 02:55:21 2021
@@ -1,24 +1,24 @@
-$NetBSD: patch-configure,v 1.2 2020/09/20 23:12:15 mef Exp $
+$NetBSD: patch-configure,v 1.3 2021/09/19 02:55:21 mef Exp $
 
 Fix the use of == in shell scripts.
 
---- configure.orig     2020-09-12 01:56:31.000000000 +0000
-+++ configure
-@@ -3628,7 +3628,7 @@ fi
+--- configure.orig     2021-08-20 17:07:16.000000000 +0900
++++ configure  2021-09-19 11:44:01.660453490 +0900
+@@ -3718,7 +3718,7 @@ fi
  
  fi
  
--if test "x$have_nc_config" == xyes; then :
-+if test "x$have_nc_config" = xyes; then :
+-if test "x$have_nc_config" == xyes
++if test "x$have_nc_config" = xyes
+ then :
  
      # Prepend linker flags to LDFLAGS:
-     { $as_echo "$as_me:${as_lineno-$LINENO}: checking netcdf linker flags" >&5
-@@ -3910,7 +3910,7 @@ fi
+@@ -4064,7 +4064,7 @@ fi
  
  
  # Define HAVE_LIBUDUNITS2 if all udunits2 checks were successful:
--if test "x$enable_calendar" == xyes; then :
-+if test "x$enable_calendar" = xyes; then :
-   $as_echo "#define HAVE_LIBUDUNITS2 1" >>confdefs.h
+-if test "x$enable_calendar" == xyes
++if test "x$enable_calendar" = xyes
+ then :
+   printf "%s\n" "#define HAVE_LIBUDUNITS2 1" >>confdefs.h
  
- else