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CVS commit: pkgsrc/math
Module Name: pkgsrc
Committed By: adam
Date: Wed Aug 30 20:04:46 UTC 2023
Modified Files:
pkgsrc/math: Makefile
pkgsrc/math/py-asdf: Makefile PLIST distinfo
Log Message:
py-asdf: updated to 2.15.1
2.15.1 (2023-08-07)
-------------------
The ASDF Standard is at v1.6.0
- Drop Python 3.8 support
- Drop NumPy 1.20, 1.21 support
- Convert numpy scalars to python types during yaml encoding
to handle NEP51 changes for numpy 2.0
- Vendorize jsonschema 4.17.3
2.15.0 (2023-03-28)
-------------------
The ASDF Standard is at v1.6.0
- Require numpy<1.25 for python 3.8
- Add AsdfProvisionalAPIWarning to warn developers of new features that
may undergo breaking changes but are likely to be included as stable
features (without this warning) in a future version of ASDF
- Add AsdfDeprecationWarning to AsdfFile.blocks
- Document policy for ASDF release cycle including when support for ASDF versions
end. Also document dependency support policy.
- Update lower pins on ``numpy`` (per release policy), ``packaging``, and ``pyyaml`` to
ones that we can successfully build and test against.
- Provide more informative filename when failing to open a file
- Add new plugin type for custom schema validators.
- Add AsdfDeprecationWarning to `~asdf.types.CustomType`
- Throw more useful error when provided with a path containing an
extra leading slash
- Add AsdfDeprecationWarning to AsdfInFits. Support for reading and
writing ASDF in fits files is being moved to `stdatamodels
<https://github.com/spacetelescope/stdatamodels>`_.
- Add AsdfDeprecationWarning to asdf.resolver
- Add AsdfDeprecationWarning to asdf.tests.helpers.assert_extension_correctness
- Add AsdfDeprecationWarning to asdf.type_index
- Add warning to use of asdftool extract and remove-hdu about deprecation
and impending removal
- Deprecate AsdfFile attributes that use the legacy extension api
- Add AsdfDeprecationWarning to asdf.types
- deprecate default_extensions, get_default_resolver and
get_cached_asdf_extension_list in asdf.extension
- move asdf.types.format_tag to asdf.testing.helpers.format_tag
- Deprecate AsdfExtenion, AsdfExtensionList, BuiltinExtension
- Add AsdfDeprecationWarning to asdf_extensions entry point
- Deprecate asdf.tests.helpers
- respect umask when determining file permissions for written files
- rename master branch to main
To generate a diff of this commit:
cvs rdiff -u -r1.569 -r1.570 pkgsrc/math/Makefile
cvs rdiff -u -r1.12 -r1.13 pkgsrc/math/py-asdf/Makefile
cvs rdiff -u -r1.4 -r1.5 pkgsrc/math/py-asdf/PLIST
cvs rdiff -u -r1.6 -r1.7 pkgsrc/math/py-asdf/distinfo
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
Modified files:
Index: pkgsrc/math/Makefile
diff -u pkgsrc/math/Makefile:1.569 pkgsrc/math/Makefile:1.570
--- pkgsrc/math/Makefile:1.569 Thu Jul 20 14:16:44 2023
+++ pkgsrc/math/Makefile Wed Aug 30 20:04:46 2023
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.569 2023/07/20 14:16:44 bacon Exp $
+# $NetBSD: Makefile,v 1.570 2023/08/30 20:04:46 adam Exp $
COMMENT= Mathematics
@@ -380,6 +380,9 @@ SUBDIR+= py-abcpmc
SUBDIR+= py-almost
SUBDIR+= py-arviz
SUBDIR+= py-asdf
+SUBDIR+= py-asdf-standard
+SUBDIR+= py-asdf-transform-schemas
+SUBDIR+= py-asdf-unit-schemas
SUBDIR+= py-asteval
SUBDIR+= py-astroML
SUBDIR+= py-astropy
Index: pkgsrc/math/py-asdf/Makefile
diff -u pkgsrc/math/py-asdf/Makefile:1.12 pkgsrc/math/py-asdf/Makefile:1.13
--- pkgsrc/math/py-asdf/Makefile:1.12 Tue Aug 1 23:20:46 2023
+++ pkgsrc/math/py-asdf/Makefile Wed Aug 30 20:04:46 2023
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.12 2023/08/01 23:20:46 wiz Exp $
+# $NetBSD: Makefile,v 1.13 2023/08/30 20:04:46 adam Exp $
-DISTNAME= asdf-2.11.0
+DISTNAME= asdf-2.15.1
PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
CATEGORIES= math python
MASTER_SITES= ${MASTER_SITE_PYPI:=a/asdf/}
@@ -10,28 +10,26 @@ HOMEPAGE= https://github.com/asdf-format
COMMENT= Advanced Scientific Data Format
LICENSE= modified-bsd
-TOOL_DEPENDS+= ${PYPKGPREFIX}-setuptools_scm-[0-9]*:../../devel/py-setuptools_scm
+TOOL_DEPENDS+= ${PYPKGPREFIX}-setuptools>=60:../../devel/py-setuptools
+TOOL_DEPENDS+= ${PYPKGPREFIX}-setuptools_scm>=3.4:../../devel/py-setuptools_scm
+TOOL_DEPENDS+= ${PYPKGPREFIX}-wheel-[0-9]*:../../devel/py-wheel
+DEPENDS+= ${PYPKGPREFIX}-asdf-standard>=1.0.1:../../math/py-asdf-standard
+DEPENDS+= ${PYPKGPREFIX}-asdf-transform-schemas>=0.3:../../math/py-asdf-transform-schemas
+DEPENDS+= ${PYPKGPREFIX}-asdf-unit-schemas>=0.1:../../math/py-asdf-unit-schemas
+DEPENDS+= ${PYPKGPREFIX}-attrs>=20.1.0":../../devel/py-attrs
+DEPENDS+= ${PYPKGPREFIX}-importlib-metadata>=4.11.4:../../devel/py-importlib-metadata
DEPENDS+= ${PYPKGPREFIX}-jmespath>=0.6.2:../../textproc/py-jmespath
-DEPENDS+= ${PYPKGPREFIX}-jsonschema>=3.0.2:../../textproc/py-jsonschema
-DEPENDS+= ${PYPKGPREFIX}-lz4>=0.10:../../archivers/py-lz4
-DEPENDS+= ${PYPKGPREFIX}-numpy>=1.10.0:../../math/py-numpy
-DEPENDS+= ${PYPKGPREFIX}-packaging>=16.0:../../devel/py-packaging
+DEPENDS+= ${PYPKGPREFIX}-jsonschema>=4.8:../../textproc/py-jsonschema
+DEPENDS+= ${PYPKGPREFIX}-numpy>=1.22:../../math/py-numpy
+DEPENDS+= ${PYPKGPREFIX}-packaging>=19:../../devel/py-packaging
DEPENDS+= ${PYPKGPREFIX}-semantic_version>=2.8:../../devel/py-semantic_version
-DEPENDS+= ${PYPKGPREFIX}-yaml>=3.10:../../textproc/py-yaml
+DEPENDS+= ${PYPKGPREFIX}-yaml>=5.4.1:../../textproc/py-yaml
USE_LANGUAGES= # none
PYTHON_VERSIONS_INCOMPATIBLE= 27 38
-USE_PKG_RESOURCES= yes
-
-.include "../../lang/python/pyversion.mk"
-
-.if ${PYTHON_VERSION} < 309
-DEPENDS+= ${PYPKGPREFIX}-importlib-resources>=3:../../devel/py-importlib-resources
-.endif
-
-REPLACE_PYTHON+= asdf-standard/reference_files/generate/generate
+REPLACE_PYTHON+= asdf/_jsonschema/json/bin/jsonschema_suite
REPLACE_PYTHON+= asdf/extern/RangeHTTPServer.py
post-install:
@@ -39,5 +37,5 @@ post-install:
${MV} asdftool asdftool-${PYVERSSUFFIX} || ${TRUE}
.include "../../lang/python/application.mk"
-.include "../../lang/python/egg.mk"
+.include "../../lang/python/wheel.mk"
.include "../../mk/bsd.pkg.mk"
Index: pkgsrc/math/py-asdf/PLIST
diff -u pkgsrc/math/py-asdf/PLIST:1.4 pkgsrc/math/py-asdf/PLIST:1.5
--- pkgsrc/math/py-asdf/PLIST:1.4 Mon Aug 29 16:20:19 2022
+++ pkgsrc/math/py-asdf/PLIST Wed Aug 30 20:04:46 2023
@@ -1,392 +1,957 @@
-@comment $NetBSD: PLIST,v 1.4 2022/08/29 16:20:19 thor Exp $
+@comment $NetBSD: PLIST,v 1.5 2023/08/30 20:04:46 adam Exp $
bin/asdftool-${PYVERSSUFFIX}
-${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
-${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
-${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
-${PYSITELIB}/${EGG_INFODIR}/entry_points.txt
-${PYSITELIB}/${EGG_INFODIR}/requires.txt
-${PYSITELIB}/${EGG_INFODIR}/top_level.txt
+${PYSITELIB}/${WHEEL_INFODIR}/INSTALLER
+${PYSITELIB}/${WHEEL_INFODIR}/LICENSE
+${PYSITELIB}/${WHEEL_INFODIR}/METADATA
+${PYSITELIB}/${WHEEL_INFODIR}/RECORD
+${PYSITELIB}/${WHEEL_INFODIR}/REQUESTED
+${PYSITELIB}/${WHEEL_INFODIR}/WHEEL
+${PYSITELIB}/${WHEEL_INFODIR}/direct_url.json
+${PYSITELIB}/${WHEEL_INFODIR}/entry_points.txt
+${PYSITELIB}/${WHEEL_INFODIR}/top_level.txt
${PYSITELIB}/asdf/__init__.py
${PYSITELIB}/asdf/__init__.pyc
-${PYSITELIB}/asdf/__init__.pyo
${PYSITELIB}/asdf/_convenience.py
${PYSITELIB}/asdf/_convenience.pyc
-${PYSITELIB}/asdf/_convenience.pyo
${PYSITELIB}/asdf/_display.py
${PYSITELIB}/asdf/_display.pyc
-${PYSITELIB}/asdf/_display.pyo
${PYSITELIB}/asdf/_helpers.py
${PYSITELIB}/asdf/_helpers.pyc
-${PYSITELIB}/asdf/_helpers.pyo
+${PYSITELIB}/asdf/_jsonschema/COPYING
+${PYSITELIB}/asdf/_jsonschema/README.md
+${PYSITELIB}/asdf/_jsonschema/__init__.py
+${PYSITELIB}/asdf/_jsonschema/__init__.pyc
+${PYSITELIB}/asdf/_jsonschema/_format.py
+${PYSITELIB}/asdf/_jsonschema/_format.pyc
+${PYSITELIB}/asdf/_jsonschema/_legacy_validators.py
+${PYSITELIB}/asdf/_jsonschema/_legacy_validators.pyc
+${PYSITELIB}/asdf/_jsonschema/_types.py
+${PYSITELIB}/asdf/_jsonschema/_types.pyc
+${PYSITELIB}/asdf/_jsonschema/_utils.py
+${PYSITELIB}/asdf/_jsonschema/_utils.pyc
+${PYSITELIB}/asdf/_jsonschema/_validators.py
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+${PYSITELIB}/asdf/_jsonschema/exceptions.py
+${PYSITELIB}/asdf/_jsonschema/exceptions.pyc
+${PYSITELIB}/asdf/_jsonschema/json/.gitignore
+${PYSITELIB}/asdf/_jsonschema/json/CONTRIBUTING.md
+${PYSITELIB}/asdf/_jsonschema/json/LICENSE
+${PYSITELIB}/asdf/_jsonschema/json/README.md
+${PYSITELIB}/asdf/_jsonschema/json/bin/jsonschema_suite
+${PYSITELIB}/asdf/_jsonschema/json/package.json
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+${PYSITELIB}/asdf/_jsonschema/json/remotes/baseUriChangeFolderInSubschema/folderInteger.json
+${PYSITELIB}/asdf/_jsonschema/json/remotes/different-id-ref-string.json
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+${PYSITELIB}/asdf/_jsonschema/json/remotes/draft-next/tree.json
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+${PYSITELIB}/asdf/_jsonschema/json/remotes/draft2019-09/integer.json
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${PYSITELIB}/asdf/tests/helpers.pyc
-${PYSITELIB}/asdf/tests/helpers.pyo
-${PYSITELIB}/asdf/tests/httpserver.py
-${PYSITELIB}/asdf/tests/httpserver.pyc
-${PYSITELIB}/asdf/tests/httpserver.pyo
-${PYSITELIB}/asdf/tests/test_api.py
-${PYSITELIB}/asdf/tests/test_api.pyc
-${PYSITELIB}/asdf/tests/test_api.pyo
-${PYSITELIB}/asdf/tests/test_array_blocks.py
-${PYSITELIB}/asdf/tests/test_array_blocks.pyc
-${PYSITELIB}/asdf/tests/test_array_blocks.pyo
-${PYSITELIB}/asdf/tests/test_asdf.py
-${PYSITELIB}/asdf/tests/test_asdf.pyc
-${PYSITELIB}/asdf/tests/test_asdf.pyo
-${PYSITELIB}/asdf/tests/test_compression.py
-${PYSITELIB}/asdf/tests/test_compression.pyc
-${PYSITELIB}/asdf/tests/test_compression.pyo
-${PYSITELIB}/asdf/tests/test_config.py
-${PYSITELIB}/asdf/tests/test_config.pyc
-${PYSITELIB}/asdf/tests/test_config.pyo
-${PYSITELIB}/asdf/tests/test_entry_points.py
-${PYSITELIB}/asdf/tests/test_entry_points.pyc
-${PYSITELIB}/asdf/tests/test_entry_points.pyo
-${PYSITELIB}/asdf/tests/test_extension.py
-${PYSITELIB}/asdf/tests/test_extension.pyc
-${PYSITELIB}/asdf/tests/test_extension.pyo
-${PYSITELIB}/asdf/tests/test_file_format.py
-${PYSITELIB}/asdf/tests/test_file_format.pyc
-${PYSITELIB}/asdf/tests/test_file_format.pyo
-${PYSITELIB}/asdf/tests/test_fits_embed.py
-${PYSITELIB}/asdf/tests/test_fits_embed.pyc
-${PYSITELIB}/asdf/tests/test_fits_embed.pyo
-${PYSITELIB}/asdf/tests/test_generic_io.py
-${PYSITELIB}/asdf/tests/test_generic_io.pyc
-${PYSITELIB}/asdf/tests/test_generic_io.pyo
-${PYSITELIB}/asdf/tests/test_helpers.py
-${PYSITELIB}/asdf/tests/test_helpers.pyc
-${PYSITELIB}/asdf/tests/test_helpers.pyo
-${PYSITELIB}/asdf/tests/test_integration.py
-${PYSITELIB}/asdf/tests/test_integration.pyc
-${PYSITELIB}/asdf/tests/test_integration.pyo
-${PYSITELIB}/asdf/tests/test_reference.py
-${PYSITELIB}/asdf/tests/test_reference.pyc
-${PYSITELIB}/asdf/tests/test_reference.pyo
-${PYSITELIB}/asdf/tests/test_reference_files.py
-${PYSITELIB}/asdf/tests/test_reference_files.pyc
-${PYSITELIB}/asdf/tests/test_reference_files.pyo
-${PYSITELIB}/asdf/tests/test_resolver.py
-${PYSITELIB}/asdf/tests/test_resolver.pyc
-${PYSITELIB}/asdf/tests/test_resolver.pyo
-${PYSITELIB}/asdf/tests/test_resource.py
-${PYSITELIB}/asdf/tests/test_resource.pyc
-${PYSITELIB}/asdf/tests/test_resource.pyo
-${PYSITELIB}/asdf/tests/test_schema.py
-${PYSITELIB}/asdf/tests/test_schema.pyc
-${PYSITELIB}/asdf/tests/test_schema.pyo
-${PYSITELIB}/asdf/tests/test_search.py
-${PYSITELIB}/asdf/tests/test_search.pyc
-${PYSITELIB}/asdf/tests/test_search.pyo
-${PYSITELIB}/asdf/tests/test_stream.py
-${PYSITELIB}/asdf/tests/test_stream.pyc
-${PYSITELIB}/asdf/tests/test_stream.pyo
-${PYSITELIB}/asdf/tests/test_tagged.py
-${PYSITELIB}/asdf/tests/test_tagged.pyc
-${PYSITELIB}/asdf/tests/test_tagged.pyo
-${PYSITELIB}/asdf/tests/test_treeutil.py
-${PYSITELIB}/asdf/tests/test_treeutil.pyc
-${PYSITELIB}/asdf/tests/test_treeutil.pyo
-${PYSITELIB}/asdf/tests/test_types.py
-${PYSITELIB}/asdf/tests/test_types.pyc
-${PYSITELIB}/asdf/tests/test_types.pyo
-${PYSITELIB}/asdf/tests/test_util.py
-${PYSITELIB}/asdf/tests/test_util.pyc
-${PYSITELIB}/asdf/tests/test_util.pyo
-${PYSITELIB}/asdf/tests/test_versioning.py
-${PYSITELIB}/asdf/tests/test_versioning.pyc
-${PYSITELIB}/asdf/tests/test_versioning.pyo
-${PYSITELIB}/asdf/tests/test_yaml.py
-${PYSITELIB}/asdf/tests/test_yaml.pyc
-${PYSITELIB}/asdf/tests/test_yaml.pyo
${PYSITELIB}/asdf/treeutil.py
${PYSITELIB}/asdf/treeutil.pyc
-${PYSITELIB}/asdf/treeutil.pyo
${PYSITELIB}/asdf/type_index.py
${PYSITELIB}/asdf/type_index.pyc
-${PYSITELIB}/asdf/type_index.pyo
${PYSITELIB}/asdf/types.py
${PYSITELIB}/asdf/types.pyc
-${PYSITELIB}/asdf/types.pyo
${PYSITELIB}/asdf/util.py
${PYSITELIB}/asdf/util.pyc
-${PYSITELIB}/asdf/util.pyo
${PYSITELIB}/asdf/versioning.py
${PYSITELIB}/asdf/versioning.pyc
-${PYSITELIB}/asdf/versioning.pyo
${PYSITELIB}/asdf/yamlutil.py
${PYSITELIB}/asdf/yamlutil.pyc
-${PYSITELIB}/asdf/yamlutil.pyo
${PYSITELIB}/pytest_asdf/__init__.py
${PYSITELIB}/pytest_asdf/__init__.pyc
-${PYSITELIB}/pytest_asdf/__init__.pyo
${PYSITELIB}/pytest_asdf/plugin.py
${PYSITELIB}/pytest_asdf/plugin.pyc
-${PYSITELIB}/pytest_asdf/plugin.pyo
Index: pkgsrc/math/py-asdf/distinfo
diff -u pkgsrc/math/py-asdf/distinfo:1.6 pkgsrc/math/py-asdf/distinfo:1.7
--- pkgsrc/math/py-asdf/distinfo:1.6 Mon Aug 29 16:20:19 2022
+++ pkgsrc/math/py-asdf/distinfo Wed Aug 30 20:04:46 2023
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.6 2022/08/29 16:20:19 thor Exp $
+$NetBSD: distinfo,v 1.7 2023/08/30 20:04:46 adam Exp $
-BLAKE2s (asdf-2.11.0.tar.gz) = 41d8a1871ab3f595144983ea243c30eff815fa40efa5d586683cd86fb22cce73
-SHA512 (asdf-2.11.0.tar.gz) = eddd0b6c9e443bf452ea10b57f3f8b8dfb8a23df4a16595ea6d9ee13844e667da3c485e11b05c41c0dd9cff49b64286585378dde785f9eab08bc50b3456851c3
-Size (asdf-2.11.0.tar.gz) = 446937 bytes
+BLAKE2s (asdf-2.15.1.tar.gz) = 7f50c3525e060c9b605ada048a6439644f408b669f6826c2f90e219b36966d8a
+SHA512 (asdf-2.15.1.tar.gz) = 4801a64ac934c891cdfdfb881e21ec179762db648ec18a197a89cd861a3411e7f19adb6ece01a2545ef5f4484858457c797200472891551b4f59dd2683430611
+Size (asdf-2.15.1.tar.gz) = 804690 bytes
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