CVS commit: pkgsrc/math/R-lme4

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sat Jan 27 10:22:20 UTC 2024

Modified Files:
        pkgsrc/math/R-lme4: Makefile distinfo

Log Message:
(math/R-lme4) Uppdate 1.1.34 to 1.1.35.1

CHANGES IN VERSION 1.1-35.1:

  USER-VISIBLE CHANGES:

         * 'lFormula' and 'glFormula' once again _do_ allow
           matrix-valued responses (for use in downstream packages like
           'galamm')

CHANGES IN VERSION 1.1-35 (2023-11-03):

  NEW FEATURES:

         * 'predict.merMod' now has a 'se.fit' method, which computes
           the standard errors of the predictions, conditional on the
           estimated 'theta' (variance-covariance) parameters

  USER-VISIBLE CHANGES:

         * using 'lmer' with a matrix-valued response now throws a more
           informative error message, directing the user to '?refit'


To generate a diff of this commit:
cvs rdiff -u -r1.9 -r1.10 pkgsrc/math/R-lme4/Makefile
cvs rdiff -u -r1.8 -r1.9 pkgsrc/math/R-lme4/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-lme4/Makefile
diff -u pkgsrc/math/R-lme4/Makefile:1.9 pkgsrc/math/R-lme4/Makefile:1.10
--- pkgsrc/math/R-lme4/Makefile:1.9     Sat Jul  8 06:06:17 2023
+++ pkgsrc/math/R-lme4/Makefile Sat Jan 27 10:22:20 2024
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.9 2023/07/08 06:06:17 mef Exp $
+# $NetBSD: Makefile,v 1.10 2024/01/27 10:22:20 mef Exp $
 
 R_PKGNAME=     lme4
-R_PKGVER=      1.1-34
+R_PKGVER=      1.1-35.1
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Linear mixed-effects models using Eigen and S4
@@ -11,8 +11,9 @@ DEPENDS+=     R-minqa>=1.1.15:../../math/R-m
 DEPENDS+=      R-nloptr>=1.0.4:../../math/R-nloptr
 
 # Packages suggested but not available:
-#  'PKPDmodels', 'MEMSS', 'mlmRev', 'optimx', 'gamm4', 'HSAUR3',
-#  'dfoptim', 'rr2', 'semEff'
+#  'MEMSS', 'mlmRev', 'optimx', 'gamm4', 'HSAUR3', 'dfoptim', 'rr2',
+#  'semEff', 'merDeriv'
+
 TEST_DEPENDS+= R-markdown-[0-9]*:../../textproc/R-rmarkdown
 TEST_DEPENDS+= R-testthat-[0-9]*:../../devel/R-testthat
 TEST_DEPENDS+= R-ggplot2-[0-9]*:../../graphics/R-ggplot2

Index: pkgsrc/math/R-lme4/distinfo
diff -u pkgsrc/math/R-lme4/distinfo:1.8 pkgsrc/math/R-lme4/distinfo:1.9
--- pkgsrc/math/R-lme4/distinfo:1.8     Sat Jul  8 06:06:17 2023
+++ pkgsrc/math/R-lme4/distinfo Sat Jan 27 10:22:20 2024
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.8 2023/07/08 06:06:17 mef Exp $
+$NetBSD: distinfo,v 1.9 2024/01/27 10:22:20 mef Exp $
 
-BLAKE2s (R/lme4_1.1-34.tar.gz) = 64938738d4ecb1937a33c1085802428b04f36cf67e0a1361de8afa9859454b61
-SHA512 (R/lme4_1.1-34.tar.gz) = 52aea4ff44d9686612972a036f97f5deb795b2cf07db80d12603cd1b23bd078799863eb7c7e9548eca8e5afe28935110ed85a4e67d64e076ee455bf06e4cacc1
-Size (R/lme4_1.1-34.tar.gz) = 2948976 bytes
+BLAKE2s (R/lme4_1.1-35.1.tar.gz) = e910bcbf2d1d7838ba0a27fff241be74e26783f1b5960904dbd5b76fbe23d644
+SHA512 (R/lme4_1.1-35.1.tar.gz) = c285d071bad962898761f1a8fff1dbd0ac0a2a40877650b6a2cf8a322a59b7241f2b96414a525f5c712d2f913e5a571176d76ad97c8138c01d0cae35db3ca11d
+Size (R/lme4_1.1-35.1.tar.gz) = 2942848 bytes