CVS commit: pkgsrc/math/py-scipy

["Adam Ciarcinski" <adam%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   adam
Date:           Wed Aug 21 10:11:44 UTC 2024

Modified Files:
        pkgsrc/math/py-scipy: Makefile PLIST distinfo

Log Message:
py-scipy: updated to 1.14.1

Issues closed for 1.14.1

BUG: doccer: \`test_decorator\` fails with Python 3.13 due to...
BUG: open_memstream unavailable with glibc >= 2.10 + C99
ENH: 3.13 wheels
BUG: spsolve prints "dgstrf info" to stdout on singular matrices
BUG: \`special.pro_rad1\`: incorrect results
BUG: sparse: \`hstack/vstack\` between a sparse and ndarray breaks...
MAINT: \`cluster\`/\`stats\`: array API test failures in main
BUG: unable to securely deploy app as scipy 1.14.0 requires write...
BUG: signal: crash in \`signaltools\` on free-threaded Python,...
CI: documentation build failing?
BUG: \`fft.hfftn\` fails on list inputs
BUG: Files in SuperLU under LGPL license
BUG: io/scipy.sparse.csgraph: refguide check failure in main
DOC: \`sampling_tdr.rst\` failing in CircleCI smoke-tutorials...
BUG: dtype changed for argument to \`rv_discrete._pmf\`
BUG: odr: pickling is not possible
DOC: build failing in CI
BLD, CI: Cirrus 3.13 wheels?

Pull requests for 1.14.1

BLD: make cp313 wheels [wheel build]
REL, MAINT: prep for 1.14.1
BUG: special: Fixes for pro_rad1
BUG: special: remove type punning to avoid warnings in LTO builds
MAINT: uarray: fix typo in \`small_dynamic_array.h\`
MAINT: adapt to array-api-strict 2.0
BLD: Enable \`open_memstream()\` on newer glibc
MAINT: Unskip \`scipy.misc.test.test_decorator\` for Python 3.13+
DOC: add release note for 1.14 sparse section about sparse array...
BUG: sparse: fix 1D for vstack/hstack and Improve 1D error msgs...
BUG: signal: fix crash under free-threaded CPython in medfilt2d
BUG: sparse.linalg: Update \`SuperLU\` to fix unfilterable output...
DOC: Fix type of \`\`html_sidebars\`\` value in \`\`conf.py\`\`
BUG: fft: fix array-like input
BUG: sparse: fix failing doctests in io and csgraph that print...
DOC: stats: silence the doctest error
MAINT: sparse.linalg: update \`SuperLU/colamd.c\` to fix license...
BUG: stats: adapt to \`np.floor\` type promotion removal
MAINT: \`stats.bartlett\`: ensure statistic is non-negative
CI: Update to cibuildwheel 2.20.0
BUG: odr: fix pickling
DOC: Don't use Sphinx 8.0.0 until gh-21323 is resolved.
BUG: sparse: Fix 1D specialty hstack codes
MAINT: special: Accommodate changed integer handling in NumPy...
BLD: cp313 wheels on \`manylinux_aarch64\`


To generate a diff of this commit:
cvs rdiff -u -r1.84 -r1.85 pkgsrc/math/py-scipy/Makefile
cvs rdiff -u -r1.29 -r1.30 pkgsrc/math/py-scipy/PLIST
cvs rdiff -u -r1.53 -r1.54 pkgsrc/math/py-scipy/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/py-scipy/Makefile
diff -u pkgsrc/math/py-scipy/Makefile:1.84 pkgsrc/math/py-scipy/Makefile:1.85
--- pkgsrc/math/py-scipy/Makefile:1.84  Tue Aug  6 09:46:17 2024
+++ pkgsrc/math/py-scipy/Makefile       Wed Aug 21 10:11:44 2024
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.84 2024/08/06 09:46:17 adam Exp $
+# $NetBSD: Makefile,v 1.85 2024/08/21 10:11:44 adam Exp $
 
-DISTNAME=      scipy-1.14.0
+DISTNAME=      scipy-1.14.1
 PKGNAME=       ${PYPKGPREFIX}-${DISTNAME}
 CATEGORIES=    math python
 MASTER_SITES=  ${MASTER_SITE_PYPI:=s/scipy/}

Index: pkgsrc/math/py-scipy/PLIST
diff -u pkgsrc/math/py-scipy/PLIST:1.29 pkgsrc/math/py-scipy/PLIST:1.30
--- pkgsrc/math/py-scipy/PLIST:1.29     Wed Jul 31 18:15:38 2024
+++ pkgsrc/math/py-scipy/PLIST  Wed Aug 21 10:11:44 2024
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.29 2024/07/31 18:15:38 adam Exp $
+@comment $NetBSD: PLIST,v 1.30 2024/08/21 10:11:44 adam Exp $
 ${PYSITELIB}/${WHEEL_INFODIR}/LICENSE.txt
 ${PYSITELIB}/${WHEEL_INFODIR}/METADATA
 ${PYSITELIB}/${WHEEL_INFODIR}/RECORD
@@ -2665,6 +2665,9 @@ ${PYSITELIB}/scipy/special/tests/test_cd
 ${PYSITELIB}/scipy/special/tests/test_cdft_asymptotic.py
 ${PYSITELIB}/scipy/special/tests/test_cdft_asymptotic.pyc
 ${PYSITELIB}/scipy/special/tests/test_cdft_asymptotic.pyo
+${PYSITELIB}/scipy/special/tests/test_cephes_intp_cast.py
+${PYSITELIB}/scipy/special/tests/test_cephes_intp_cast.pyc
+${PYSITELIB}/scipy/special/tests/test_cephes_intp_cast.pyo
 ${PYSITELIB}/scipy/special/tests/test_cosine_distr.py
 ${PYSITELIB}/scipy/special/tests/test_cosine_distr.pyc
 ${PYSITELIB}/scipy/special/tests/test_cosine_distr.pyo

Index: pkgsrc/math/py-scipy/distinfo
diff -u pkgsrc/math/py-scipy/distinfo:1.53 pkgsrc/math/py-scipy/distinfo:1.54
--- pkgsrc/math/py-scipy/distinfo:1.53  Wed Jul 31 18:15:38 2024
+++ pkgsrc/math/py-scipy/distinfo       Wed Aug 21 10:11:44 2024
@@ -1,8 +1,8 @@
-$NetBSD: distinfo,v 1.53 2024/07/31 18:15:38 adam Exp $
+$NetBSD: distinfo,v 1.54 2024/08/21 10:11:44 adam Exp $
 
-BLAKE2s (scipy-1.14.0.tar.gz) = 6fe964536a9daa776c4912ba2cc938bc8d84ee9bdaa9cbe90053ecacc5dd0c8a
-SHA512 (scipy-1.14.0.tar.gz) = 6579d988a2093602f5fc82203bbb5dc5690a95032484b5d5bd843d1e7995b3b89d802c7b38ec0345c1f3d8e22c98fb92b3982a1eadfcdf63607f929a52b56abf
-Size (scipy-1.14.0.tar.gz) = 58618870 bytes
+BLAKE2s (scipy-1.14.1.tar.gz) = d4b5c917f78aa12ae62bfcd167469aa3b5ea4b79670b5919503f1089913277fb
+SHA512 (scipy-1.14.1.tar.gz) = 20e3cf13590f76dfdc40ca8f90e6d5a68502e74415f37fa24fdb8169098e1d7f0aa631ae742c8c3e9573fa7d63da61986d51f35f090a3785873ae0761f7fcfa6
+Size (scipy-1.14.1.tar.gz) = 58620554 bytes
 SHA1 (patch-scipy_spatial___ckdtree.pyx) = 09f79827790edb78204cca7bbe25b5f373834dd4
 SHA1 (patch-scipy_spatial_ckdtree_src_ckdtree__decl.h) = f05aa0f0ebbf49f119b17ce8646d2f496a557019
 SHA1 (patch-scipy_special_Faddeeva.hh) = 9f6c0bb808fc9be0a1c1b7e65395d29f13821233