[pkgsrc/trunk]: pkgsrc/parallel/mpi-ch Update mpich to 3.2.1.

[bsiegert <bsiegert%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/9ccb85ab6613
branches:  trunk
changeset: 314673:9ccb85ab6613
user:      bsiegert <bsiegert%pkgsrc.org@localhost>
date:      Sun Nov 04 11:49:40 2018 +0000

description:
Update mpich to 3.2.1.

Patch from Eric A. Borisch via pull request.
Closes NetBSD/pkgsrc#38.

Remove patches no longer needed; migrate to configure option for rpath.

===============================================================================
                               Changes in 3.2.1
===============================================================================

 # Fixes for platforms with strict memory alignment requirements.

 # Fixes for MPI_Win info management.

 # Fixed a progress bug with MPI generalized requests.

 # Fixed multiple integer overflow bugs in CH3 and ROMIO.

 # Improved detection for Fortran 2008 binding support.

 # Enhanced support for libfabric (OFI) netmod.

 # Several other minor bug fixes, memory leak fixes, and code cleanup.

   A full list of changes is available at the following link:

     http://git.mpich.org/mpich.git/shortlog/v3.2..v3.2.1

diffstat:

 parallel/mpi-ch/Makefile                  |   9 +++------
 parallel/mpi-ch/PLIST                     |   4 +++-
 parallel/mpi-ch/distinfo                  |  12 ++++++------
 parallel/mpi-ch/patches/patch-Makefile.in |  12 +-----------
 4 files changed, 13 insertions(+), 24 deletions(-)

diffs (93 lines):

diff -r 7ec25ec60124 -r 9ccb85ab6613 parallel/mpi-ch/Makefile
--- a/parallel/mpi-ch/Makefile  Sun Nov 04 09:14:41 2018 +0000
+++ b/parallel/mpi-ch/Makefile  Sun Nov 04 11:49:40 2018 +0000
@@ -1,7 +1,6 @@
-# $NetBSD: Makefile,v 1.85 2018/08/22 09:46:10 wiz Exp $
+# $NetBSD: Makefile,v 1.86 2018/11/04 11:49:40 bsiegert Exp $
 
-DISTNAME=      mpich-3.2
-PKGREVISION=   1
+DISTNAME=      mpich-3.2.1
 CATEGORIES=    parallel
 MASTER_SITES=  http://www.mpich.org/static/tarballs/${PKGVERSION_NOREV}/
 
@@ -31,9 +30,7 @@
 CONFIGURE_ARGS+=       --with-openpa-prefix=${BUILDLINK_PREFIX.openpa}
 CONFIGURE_ARGS+=       --with-pm=hydra:gforker
 CONFIGURE_ARGS+=       --with-thread-package=posix
-# Make MPI compiler wrapper usable outside pkgsrc:
-CONFIGURE_ENV+=                WRAPPER_LDFLAGS="-L${MPI_PREFIX}/lib ${COMPILER_RPATH_FLAG}${MPI_PREFIX}/lib"
-CONFIGURE_ENV+=                MPICH_LDFLAGS="-L${MPI_PREFIX}/lib ${COMPILER_RPATH_FLAG}${MPI_PREFIX}/lib"
+CONFIGURE_ARGS+=       --enable-wrapper-rpath
 
 LDFLAGS+=              -lm
 
diff -r 7ec25ec60124 -r 9ccb85ab6613 parallel/mpi-ch/PLIST
--- a/parallel/mpi-ch/PLIST     Sun Nov 04 09:14:41 2018 +0000
+++ b/parallel/mpi-ch/PLIST     Sun Nov 04 11:49:40 2018 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.23 2017/06/20 17:24:06 adam Exp $
+@comment $NetBSD: PLIST,v 1.24 2018/11/04 11:49:40 bsiegert Exp $
 bin/hydra_nameserver
 bin/hydra_persist
 bin/hydra_pmi_proxy
@@ -42,6 +42,7 @@
 man/man1/mpiexec.1
 man/man1/mpif77.1
 man/man1/mpifort.1
+man/man3/Constants.3
 man/man3/MPIX_Comm_agree.3
 man/man3/MPIX_Comm_failure_ack.3
 man/man3/MPIX_Comm_failure_get_acked.3
@@ -448,6 +449,7 @@
 share/doc/mpich/html/www1/mpiexec.html
 share/doc/mpich/html/www1/mpif77.html
 share/doc/mpich/html/www1/mpifort.html
+share/doc/mpich/html/www3/Constants.html
 share/doc/mpich/html/www3/MPIX_Comm_agree.html
 share/doc/mpich/html/www3/MPIX_Comm_failure_ack.html
 share/doc/mpich/html/www3/MPIX_Comm_failure_get_acked.html
diff -r 7ec25ec60124 -r 9ccb85ab6613 parallel/mpi-ch/distinfo
--- a/parallel/mpi-ch/distinfo  Sun Nov 04 09:14:41 2018 +0000
+++ b/parallel/mpi-ch/distinfo  Sun Nov 04 11:49:40 2018 +0000
@@ -1,10 +1,10 @@
-$NetBSD: distinfo,v 1.26 2017/04/29 18:18:52 adam Exp $
+$NetBSD: distinfo,v 1.27 2018/11/04 11:49:40 bsiegert Exp $
 
-SHA1 (mpich-3.2.tar.gz) = 5fae7df02f750b6966837b554f9985a9c574236f
-RMD160 (mpich-3.2.tar.gz) = d7180d5129fe313830504e1d59c3b37831554bee
-SHA512 (mpich-3.2.tar.gz) = 083c51655b4355827bd7fa4fe528046e2bc77b7747d869ff87b79fa324c3cc2a9b5640ccb7271490ccc0dd627e354a33a449bbab448501bbfddcfe5f999ee717
-Size (mpich-3.2.tar.gz) = 11862150 bytes
-SHA1 (patch-Makefile.in) = 5f98d902eae4102f283ddb1721e4d089d8a81779
+SHA1 (mpich-3.2.1.tar.gz) = 24c53333927d1760db78be2b9ef217f4f3dcf771
+RMD160 (mpich-3.2.1.tar.gz) = b830ba3f5cb5401c03898ad9abf87c60d5cf1e50
+SHA512 (mpich-3.2.1.tar.gz) = 659a11cf02302f27eb1db77667dd4c7a4f8008b1d73f5f0f0f28ee6b5d9cca2130bac3d010a132136ba15a25a738ec9cbda67255133aeb42f0d82a2ded23d23d
+Size (mpich-3.2.1.tar.gz) = 11908154 bytes
+SHA1 (patch-Makefile.in) = 7fee6ae5e86943f7ea1b3eef103c5b5b4b66490b
 SHA1 (patch-configure) = 00c5706f825dbadeb544d14ee98a1a27e49d0797
 SHA1 (patch-src_mpi_romio_configure) = a517932dd1af1cc0da889b838fd732a5fb766910
 SHA1 (patch-src_mpid_ch3_channels_nemesis_include_mpidi_ch3_impl.h) = ec7d063fb22fbfb3fc1ee85197afd6f4c4db22bd
diff -r 7ec25ec60124 -r 9ccb85ab6613 parallel/mpi-ch/patches/patch-Makefile.in
--- a/parallel/mpi-ch/patches/patch-Makefile.in Sun Nov 04 09:14:41 2018 +0000
+++ b/parallel/mpi-ch/patches/patch-Makefile.in Sun Nov 04 11:49:40 2018 +0000
@@ -1,19 +1,9 @@
-$NetBSD: patch-Makefile.in,v 1.3 2017/04/29 18:18:52 adam Exp $
+$NetBSD: patch-Makefile.in,v 1.4 2018/11/04 11:49:40 bsiegert Exp $
 
-Link mpiexec.gforker also against mpllib.
 Do not create libopa symlink; it conflicts with parallel/openpa/PLIST.
 
 --- Makefile.in.orig   2015-11-12 04:08:10.000000000 +0000
 +++ Makefile.in
-@@ -10241,7 +10242,7 @@ common_pm_includes = \
- # we may not want to add AM_CPPFLAGS for this program
- @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_TRUE@src_pm_gforker_mpiexec_CPPFLAGS = $(common_pm_includes) $(AM_CPPFLAGS)
- @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_SOURCES = src/pm/gforker/mpiexec.c 
--@BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_LDADD = src/pm/util/libmpiexec.a
-+@BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_LDADD = src/pm/util/libmpiexec.a $(mpllib)
- # we may not want to add AM_CPPFLAGS for this program
- @BUILD_PM_GFORKER_TRUE@@PRIMARY_PM_GFORKER_FALSE@src_pm_gforker_mpiexec_gforker_CPPFLAGS = $(common_pm_includes) $(AM_CPPFLAGS)
- @BUILD_PM_REMSHELL_TRUE@@PRIMARY_PM_REMSHELL_TRUE@src_pm_remshell_mpiexec_SOURCES = src/pm/remshell/mpiexec.c 
 @@ -39783,9 +39784,6 @@ install-exec-hook:
                if test "@MPILIBNAME@" != "mpl" ; then \
                        cd ${DESTDIR}${libdir} && ln -f -s lib@MPILIBNAME@@SHLIB_EXT@ libmpl@SHLIB_EXT@ ; \