[pkgsrc/trunk]: pkgsrc/biology New package, maeparser-1.4.2.

[bsiegert <bsiegert%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/881218ec9756
branches:  trunk
changeset: 441415:881218ec9756
user:      bsiegert <bsiegert%pkgsrc.org@localhost>
date:      Tue Nov 03 16:41:26 2020 +0000

description:
New package, maeparser-1.4.2.

maeparser is a parser for Schrodinger Maestro files.

Structure files (.mae,.maegz,.mae.gz) can contain multiple structures
delimited by "f_m_ct".  See MaeConstants.hpp for standard block and property
names.

diffstat:

 biology/Makefile                |   3 ++-
 biology/maeparser/DESCR         |   5 +++++
 biology/maeparser/Makefile      |  19 +++++++++++++++++++
 biology/maeparser/PLIST         |  13 +++++++++++++
 biology/maeparser/buildlink3.mk |  15 +++++++++++++++
 biology/maeparser/distinfo      |   6 ++++++
 6 files changed, 60 insertions(+), 1 deletions(-)

diffs (95 lines):

diff -r a5ae69352f29 -r 881218ec9756 biology/Makefile
--- a/biology/Makefile  Tue Nov 03 16:39:14 2020 +0000
+++ b/biology/Makefile  Tue Nov 03 16:41:26 2020 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.56 2020/08/10 18:18:46 brook Exp $
+# $NetBSD: Makefile,v 1.57 2020/11/03 16:41:26 bsiegert Exp $
 #
 
 COMMENT=       Software for the biological sciences
@@ -30,6 +30,7 @@
 SUBDIR+=       htslib
 SUBDIR+=       kallisto
 SUBDIR+=       lucy
+SUBDIR+=       maeparser
 SUBDIR+=       mopac
 SUBDIR+=       mpqc
 SUBDIR+=       mummer
diff -r a5ae69352f29 -r 881218ec9756 biology/maeparser/DESCR
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/biology/maeparser/DESCR   Tue Nov 03 16:41:26 2020 +0000
@@ -0,0 +1,5 @@
+maeparser is a parser for Schrodinger Maestro files.
+
+Structure files (.mae,.maegz,.mae.gz) can contain multiple structures
+delimited by "f_m_ct".  See MaeConstants.hpp for standard block and property
+names.
diff -r a5ae69352f29 -r 881218ec9756 biology/maeparser/Makefile
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/biology/maeparser/Makefile        Tue Nov 03 16:41:26 2020 +0000
@@ -0,0 +1,19 @@
+# $NetBSD: Makefile,v 1.1 2020/11/03 16:41:26 bsiegert Exp $
+
+GITHUB_TAG=    v${PKGVERSION_NOREV}
+DISTNAME=      maeparser-1.2.4
+CATEGORIES=    biology
+MASTER_SITES=  ${MASTER_SITE_GITHUB:=schrodinger/}
+
+MAINTAINER=    bsiegert%NetBSD.org@localhost
+HOMEPAGE=      https://github.com/schrodinger/maeparser/
+COMMENT=       Parser for Maestro file format
+LICENSE=       mit
+
+USE_CMAKE=     yes
+USE_LANGUAGES= c c++
+
+
+.include "../../devel/boost-libs/buildlink3.mk"
+.include "../../devel/zlib/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff -r a5ae69352f29 -r 881218ec9756 biology/maeparser/PLIST
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/biology/maeparser/PLIST   Tue Nov 03 16:41:26 2020 +0000
@@ -0,0 +1,13 @@
+@comment $NetBSD: PLIST,v 1.1 2020/11/03 16:41:26 bsiegert Exp $
+include/maeparser/Buffer.hpp
+include/maeparser/MaeBlock.hpp
+include/maeparser/MaeConstants.hpp
+include/maeparser/MaeParser.hpp
+include/maeparser/MaeParserConfig.hpp
+include/maeparser/Reader.hpp
+include/maeparser/Writer.hpp
+lib/cmake/maeparser-config-noconfig.cmake
+lib/cmake/maeparser-config.cmake
+lib/libmaeparser.so
+lib/libmaeparser.so.1
+lib/libmaeparser.so.${PKGVERSION}
diff -r a5ae69352f29 -r 881218ec9756 biology/maeparser/buildlink3.mk
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/biology/maeparser/buildlink3.mk   Tue Nov 03 16:41:26 2020 +0000
@@ -0,0 +1,15 @@
+# $NetBSD: buildlink3.mk,v 1.1 2020/11/03 16:41:26 bsiegert Exp $
+
+BUILDLINK_TREE+=       maeparser
+
+.if !defined(MAEPARSER_BUILDLINK3_MK)
+MAEPARSER_BUILDLINK3_MK:=
+
+BUILDLINK_API_DEPENDS.maeparser+=      maeparser>=1.2.4
+BUILDLINK_PKGSRCDIR.maeparser?=        ../../biology/maeparser
+
+.include "../../devel/boost-libs/buildlink3.mk"
+.include "../../devel/zlib/buildlink3.mk"
+.endif # MAEPARSER_BUILDLINK3_MK
+
+BUILDLINK_TREE+=       -maeparser
diff -r a5ae69352f29 -r 881218ec9756 biology/maeparser/distinfo
--- /dev/null   Thu Jan 01 00:00:00 1970 +0000
+++ b/biology/maeparser/distinfo        Tue Nov 03 16:41:26 2020 +0000
@@ -0,0 +1,6 @@
+$NetBSD: distinfo,v 1.1 2020/11/03 16:41:26 bsiegert Exp $
+
+SHA1 (maeparser-1.2.4.tar.gz) = 51654efcd3ca8b9c027ac58e735ec6c313bfe087
+RMD160 (maeparser-1.2.4.tar.gz) = 595c8881aa1a368c8d6cfcd9af13076c58f9b403
+SHA512 (maeparser-1.2.4.tar.gz) = b8862099c725007b81e7da574fa1c9f1ae00481a6427a1ae7b07dda6043b9c08008fc9e352858e6830fb8cecc1cf70edb5681299e8c91050e9f0ad1606e527e3
+Size (maeparser-1.2.4.tar.gz) = 38285 bytes