CVS commit: pkgsrc/biology/py-dnaio

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Mon Feb  8 01:52:24 UTC 2021

Added Files:
        pkgsrc/biology/py-dnaio: DESCR Makefile PLIST distinfo

Log Message:
biology/py-dnaio: import py38-dnaio-0.5.0

dnaio is a Python 3 library for fast input and output of FASTQ and FASTA files.
It supports paired-end data in separate files, interleaved paired-end in a
single file and compression using gzip, bzip, and xz.


To generate a diff of this commit:
cvs rdiff -u -r0 -r1.1 pkgsrc/biology/py-dnaio/DESCR \
    pkgsrc/biology/py-dnaio/Makefile pkgsrc/biology/py-dnaio/PLIST \
    pkgsrc/biology/py-dnaio/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Added files:

Index: pkgsrc/biology/py-dnaio/DESCR
diff -u /dev/null pkgsrc/biology/py-dnaio/DESCR:1.1
--- /dev/null   Mon Feb  8 01:52:24 2021
+++ pkgsrc/biology/py-dnaio/DESCR       Mon Feb  8 01:52:24 2021
@@ -0,0 +1,3 @@
+dnaio is a Python 3 library for fast input and output of FASTQ and FASTA files.
+It supports paired-end data in separate files, interleaved paired-end in a
+single file and compression using gzip, bzip, and xz.
Index: pkgsrc/biology/py-dnaio/Makefile
diff -u /dev/null pkgsrc/biology/py-dnaio/Makefile:1.1
--- /dev/null   Mon Feb  8 01:52:24 2021
+++ pkgsrc/biology/py-dnaio/Makefile    Mon Feb  8 01:52:24 2021
@@ -0,0 +1,14 @@
+# $NetBSD: Makefile,v 1.1 2021/02/08 01:52:24 bacon Exp $
+
+DISTNAME=      dnaio-0.5.0
+PKGNAME=       ${PYPKGPREFIX}-${DISTNAME}
+CATEGORIES=    biology
+MASTER_SITES=  ${MASTER_SITE_PYPI:=d/dnaio/}
+
+MAINTAINER=    bacon%NetBSD.org@localhost
+HOMEPAGE=      https://github.com/marcelm/dnaio
+COMMENT=       Read and write FASTQ and FASTA files
+LICENSE=       mit
+
+.include "../../lang/python/egg.mk"
+.include "../../mk/bsd.pkg.mk"
Index: pkgsrc/biology/py-dnaio/PLIST
diff -u /dev/null pkgsrc/biology/py-dnaio/PLIST:1.1
--- /dev/null   Mon Feb  8 01:52:24 2021
+++ pkgsrc/biology/py-dnaio/PLIST       Mon Feb  8 01:52:24 2021
@@ -0,0 +1,28 @@
+@comment $NetBSD: PLIST,v 1.1 2021/02/08 01:52:24 bacon Exp $
+${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
+${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
+${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
+${PYSITELIB}/${EGG_INFODIR}/requires.txt
+${PYSITELIB}/${EGG_INFODIR}/top_level.txt
+${PYSITELIB}/dnaio/__init__.py
+${PYSITELIB}/dnaio/__init__.pyo
+${PYSITELIB}/dnaio/__init__.pyc
+${PYSITELIB}/dnaio/_util.pyo
+${PYSITELIB}/dnaio/_util.pyc
+${PYSITELIB}/dnaio/_version.pyo
+${PYSITELIB}/dnaio/_version.pyc
+${PYSITELIB}/dnaio/chunks.pyo
+${PYSITELIB}/dnaio/chunks.pyc
+${PYSITELIB}/dnaio/exceptions.pyo
+${PYSITELIB}/dnaio/exceptions.pyc
+${PYSITELIB}/dnaio/readers.pyo
+${PYSITELIB}/dnaio/readers.pyc
+${PYSITELIB}/dnaio/writers.pyo
+${PYSITELIB}/dnaio/writers.pyc
+${PYSITELIB}/dnaio/_core.so
+${PYSITELIB}/dnaio/_util.py
+${PYSITELIB}/dnaio/_version.py
+${PYSITELIB}/dnaio/chunks.py
+${PYSITELIB}/dnaio/exceptions.py
+${PYSITELIB}/dnaio/readers.py
+${PYSITELIB}/dnaio/writers.py
Index: pkgsrc/biology/py-dnaio/distinfo
diff -u /dev/null pkgsrc/biology/py-dnaio/distinfo:1.1
--- /dev/null   Mon Feb  8 01:52:24 2021
+++ pkgsrc/biology/py-dnaio/distinfo    Mon Feb  8 01:52:24 2021
@@ -0,0 +1,6 @@
+$NetBSD: distinfo,v 1.1 2021/02/08 01:52:24 bacon Exp $
+
+SHA1 (dnaio-0.5.0.tar.gz) = 466b533b83ef34baab0492199264a6d88d34be57
+RMD160 (dnaio-0.5.0.tar.gz) = 731c217d956cf03088851579bd364d510b8222ec
+SHA512 (dnaio-0.5.0.tar.gz) = 2e6a0dd04558b70ee08a81fd1d118525734df52701735cc27bab4c423c2030ec2fb6e83ddf02c491e1eb250c471d230b8fa72993c3a20ae844716c9542059c67
+Size (dnaio-0.5.0.tar.gz) = 126321 bytes