CVS commit: pkgsrc/math/R-broom

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sun Dec 18 10:26:18 UTC 2022

Modified Files:
        pkgsrc/math/R-broom: Makefile distinfo

Log Message:
(math/R-broom)  Updated 0.8.0 to 1.0.2

# broom 1.0.2

* The default `data` argument for `augment.coxph()` and
  `augment.survreg()` has been transitioned from `NULL` to
  `model.frame(x)` (#1126 by `@capnrefsmmat`).
* Migrated 'ggplot2' from strong to weak dependency, i.e. moved from
  `Imports` to `Suggests`.
* Fixed a bug where `augment()` results would not include residuals
  when the response term included a function call (#1121, #946, #937,
  #124).

# broom 1.0.1

* Improves performance of `tidy.lm()` and `tidy.glm()` for full-rank
  fits (#1112 by `@capnrefsmmat`).

* Moves forward with deprecation of tidiers for sparse matrices
  outputted from the Matrix package, initially soft-deprecated in
  broom 0.5.0. The Matrix tidiers were light wrappers around coercion
  methods that will now be deprecated from Matrix itself in the
  upcoming 1.4-2 release. The affected methods are
  `tidy.sparseMatrix()`, `tidy.dgCMatrix()`, and
  `tidy.dgTMatrix()`. Note that `tidy.confusionMatrix()`, for relevant
  objects outputted from the caret package, is unaffected (#1113).

* `tidy.anova()` works again with `anova` objects from the `lme4`
  package (broken by addition of the `terms` column in the previous
  release)

# broom 1.0.0

broom 1.0.0 is the first "production" release of the broom package,
and includes a number of notable changes to both functionality and
governance.

As of this release, the broom team will be following a set of
guidelines that clarify the scope of further development on the
package. Given the package's wide use and long history, these
guidelines _prioritize backward compatibility_ over internal
consistency and completeness. You can read those guidelines
[here](https://broom.tidymodels.org/articles/)!

We've also made notable changes to error handling in this release:

* Adds minimal ellipsis checking to warn on commonly misspecified
  arguments passed through ellipses. Notably:
    + `tidy()` methods will now warn when supplied an `exponentiate`
      argument if it will be ignored.
    + `augment()` methods will now warn when supplied a `newdata`
       argument if it will be ignored.

* The warning regarding tidiers only maintained via dispatch to `lm`
  and `glm` is now displayed only once per session, per unique
  dispatch. That is, if a `class_a` object is tidied using a `(g)lm`
  method, broom will not warn when tidying `class_a` objects for the
  rest of the session, but if a `class_b` object is tidied using a
  `(g)lm` method in the same session, broom will warn again (#1101).

Other fixes and improvements:

* Add `exponentiate` argument to `tidy.boot()` (#1039).
* Update in `tidy.htest()` converting matrix-columns to vector-columns (#1081).
* Address failures in `tidy.glht()` with `conf.int = TRUE` (#1103).
* Address failures in `tidy.zoo()` when input data does not have `colnames`
  (#1080).
* Transition tidiers for bivariate linear or spline-based interpolation---using
  list tidiers to interface with objects from the akima package is now
  considered off-label. See the interp package for a FOSS alternative.
* Address failures in `tidy.svyolr()` when `p.values = TRUE`. Instead of aliasing
  `tidy.polr()` directly, `tidy.svyolr()` lightly wraps that method and
  warns if `p.values` is supplied (#1107).
* Adds a `term` column and introduces support for `car::lht()` output in
  `tidy.anova()` (#1106 by `@grantmcdermott`).
* Adds a dedicated `glance.anova` method (which previously dispatched to the
  deprecated `glance.data.frame()` tidier, #1106 by `@grantmcdermott`).


To generate a diff of this commit:
cvs rdiff -u -r1.2 -r1.3 pkgsrc/math/R-broom/Makefile
cvs rdiff -u -r1.4 -r1.5 pkgsrc/math/R-broom/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-broom/Makefile
diff -u pkgsrc/math/R-broom/Makefile:1.2 pkgsrc/math/R-broom/Makefile:1.3
--- pkgsrc/math/R-broom/Makefile:1.2    Thu May  5 01:58:35 2022
+++ pkgsrc/math/R-broom/Makefile        Sun Dec 18 10:26:18 2022
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.2 2022/05/05 01:58:35 mef Exp $
+# $NetBSD: Makefile,v 1.3 2022/12/18 10:26:18 mef Exp $
 
 R_PKGNAME=     broom
-R_PKGVER=      0.8.0
+R_PKGVER=      1.0.2
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Convert Statistical Objects into Tidy Tibbles

Index: pkgsrc/math/R-broom/distinfo
diff -u pkgsrc/math/R-broom/distinfo:1.4 pkgsrc/math/R-broom/distinfo:1.5
--- pkgsrc/math/R-broom/distinfo:1.4    Thu May  5 01:58:35 2022
+++ pkgsrc/math/R-broom/distinfo        Sun Dec 18 10:26:18 2022
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.4 2022/05/05 01:58:35 mef Exp $
+$NetBSD: distinfo,v 1.5 2022/12/18 10:26:18 mef Exp $
 
-BLAKE2s (R/broom_0.8.0.tar.gz) = 86dca640cd540d430c4659e7eb60b30c14b0fc0a73821e6e07ddc32738f828ab
-SHA512 (R/broom_0.8.0.tar.gz) = b9b0b7db1f151614f20fe42e7bfc34e1fc1aab1498e3280c67a530ba7972645694fb1638448827b14e70a56b9b743e51d7a3a7216c1f49067037ad837ce6e4fe
-Size (R/broom_0.8.0.tar.gz) = 640392 bytes
+BLAKE2s (R/broom_1.0.2.tar.gz) = a1e3f7450ed6dfa05083d58c7ee333e74f33029b05313d06c02fb81a4907bc7b
+SHA512 (R/broom_1.0.2.tar.gz) = f7df906b54dbdf2980a5d523c28e75ef364fb60a2ca97932b5448971e7a72de07f32a7050bde7dc8b88d8893e24e744a8b4989fc4bde4319d1152ae11cfe991a
+Size (R/broom_1.0.2.tar.gz) = 641801 bytes