CVS commit: pkgsrc/biology/vsearch

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Sun Feb 16 14:30:21 UTC 2025

Modified Files:
        pkgsrc/biology/vsearch: Makefile PLIST distinfo

Log Message:
biology/vsearch: Update to 2.29.4

Fix regression from 2.23.0 regarding chimera detection
Add pragma to ensure correct code
Changes: https://github.com/torognes/vsearch/releases
Reported by: portscout


To generate a diff of this commit:
cvs rdiff -u -r1.12 -r1.13 pkgsrc/biology/vsearch/Makefile
cvs rdiff -u -r1.11 -r1.12 pkgsrc/biology/vsearch/PLIST
cvs rdiff -u -r1.14 -r1.15 pkgsrc/biology/vsearch/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/vsearch/Makefile
diff -u pkgsrc/biology/vsearch/Makefile:1.12 pkgsrc/biology/vsearch/Makefile:1.13
--- pkgsrc/biology/vsearch/Makefile:1.12        Sun Dec 29 21:05:44 2024
+++ pkgsrc/biology/vsearch/Makefile     Sun Feb 16 14:30:21 2025
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.12 2024/12/29 21:05:44 bacon Exp $
+# $NetBSD: Makefile,v 1.13 2025/02/16 14:30:21 bacon Exp $
 
-DISTNAME=      vsearch-2.29.2
+DISTNAME=      vsearch-2.29.4
 CATEGORIES=    biology
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=torognes/}
 GITHUB_TAG=    v${PKGVERSION_NOREV}

Index: pkgsrc/biology/vsearch/PLIST
diff -u pkgsrc/biology/vsearch/PLIST:1.11 pkgsrc/biology/vsearch/PLIST:1.12
--- pkgsrc/biology/vsearch/PLIST:1.11   Sun Dec 29 21:05:44 2024
+++ pkgsrc/biology/vsearch/PLIST        Sun Feb 16 14:30:21 2025
@@ -1,3 +1,3 @@
-@comment $NetBSD: PLIST,v 1.11 2024/12/29 21:05:44 bacon Exp $
+@comment $NetBSD: PLIST,v 1.12 2025/02/16 14:30:21 bacon Exp $
 bin/vsearch
 man/man1/vsearch.1

Index: pkgsrc/biology/vsearch/distinfo
diff -u pkgsrc/biology/vsearch/distinfo:1.14 pkgsrc/biology/vsearch/distinfo:1.15
--- pkgsrc/biology/vsearch/distinfo:1.14        Sun Dec 29 21:05:44 2024
+++ pkgsrc/biology/vsearch/distinfo     Sun Feb 16 14:30:21 2025
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.14 2024/12/29 21:05:44 bacon Exp $
+$NetBSD: distinfo,v 1.15 2025/02/16 14:30:21 bacon Exp $
 
-BLAKE2s (vsearch-2.29.2.tar.gz) = d95c19e0a87afee758d1a161a53410de26ecd5561ea484eaed23907f07b2f23a
-SHA512 (vsearch-2.29.2.tar.gz) = 713c3c4b7f71750b790dadb90226909686f4e1a1ef2cfda404c3bf0f87df286a24f0b33633e9bf16e7e4432a933ac0e0fa6426f04fdd5c3015a52f973007b59b
-Size (vsearch-2.29.2.tar.gz) = 284526 bytes
+BLAKE2s (vsearch-2.29.4.tar.gz) = e9c0fe36c6db95226be2981124acb4b7be99b166db07e514544ababef7f9ef69
+SHA512 (vsearch-2.29.4.tar.gz) = ee8de9413ba9561adb57e29bec0aee6bfc11ecf6c5dcce0804aa4d8070c405a9f26db9d5f5777eb8ea90f48c825f6c4d0a440e9199fb51e884881851aedfda0c
+Size (vsearch-2.29.4.tar.gz) = 285118 bytes