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htslib: Clean up pkglint issues
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon4000%gmail.com@localhost>
Pushed By: outpaddling
Date: Fri May 12 08:34:25 2017 -0500
Changeset: b13c927fa770e975a92f4659936b306288f7479d
Modified Files:
htslib/Makefile
htslib/PLIST
Log Message:
htslib: Clean up pkglint issues
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=b13c927fa770e975a92f4659936b306288f7479d
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
htslib/Makefile | 14 +++++++-------
htslib/PLIST | 4 ++--
2 files changed, 9 insertions(+), 9 deletions(-)
diffs:
diff --git a/htslib/Makefile b/htslib/Makefile
index dc11bcf705..c110ebbb49 100644
--- a/htslib/Makefile
+++ b/htslib/Makefile
@@ -8,15 +8,15 @@
DISTNAME= htslib-${PORTVERSION}
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
-GITHUB_PROJECT= htslib
-GITHUB_TAG= ${PORTVERSION}
MAINTAINER= bacon4000%gmail.com@localhost
HOMEPAGE= http://www.htslib.org/
COMMENT= C library for high-throughput sequencing data formats
-
LICENSE= mit
+GITHUB_PROJECT= htslib
+GITHUB_TAG= ${PORTVERSION}
+
USE_TOOLS+= autoconf automake autoreconf gmake perl
GNU_CONFIGURE= yes
REPLACE_PERL= test/compare_sam.pl test/test.pl test/test_view.pl
@@ -28,10 +28,10 @@ SUBST_FILES.version+= ${WRKSRC}/configure.ac
CPPFLAGS+= -I${PREFIX}/include
-MAKE_ENV= INSTALL_LIB="${INSTALL_LIB}" \
- INSTALL_DATA="${INSTALL_DATA}" \
- INSTALL_PROGRAM="${INSTALL_PROGRAM}" \
- INSTALL_DIR="${MKDIR}"
+MAKE_ENV= INSTALL_LIB=${INSTALL_LIB:Q} \
+ INSTALL_DATA=${INSTALL_DATA:Q} \
+ INSTALL_PROGRAM=${INSTALL_PROGRAM:Q} \
+ INSTALL_DIR=${MKDIR:Q}
PORTVERSION= 1.3.1
diff --git a/htslib/PLIST b/htslib/PLIST
index 04c43a11f3..d563be4a55 100644
--- a/htslib/PLIST
+++ b/htslib/PLIST
@@ -6,8 +6,8 @@ include/htslib/bgzf.h
include/htslib/cram.h
include/htslib/faidx.h
include/htslib/hfile.h
-include/htslib/hts_defs.h
include/htslib/hts.h
+include/htslib/hts_defs.h
include/htslib/kbitset.h
include/htslib/kfunc.h
include/htslib/khash.h
@@ -24,11 +24,11 @@ include/htslib/tbx.h
include/htslib/vcf.h
include/htslib/vcf_sweep.h
include/htslib/vcfutils.h
-libdata/pkgconfig/htslib.pc
lib/libhts.a
lib/libhts.so
lib/libhts.so.1
lib/libhts.so.${PKGVERSION}
+libdata/pkgconfig/htslib.pc
man/man1/htsfile.1
man/man1/tabix.1
man/man5/faidx.5
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