fastahack: use upstream & our Makefile

[Winston Weinert <winston%ml1.net@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Winston Weinert <winston%ml1.net@localhost>
Pushed By:	winston
Date:		Thu Mar 29 20:47:34 2018 -0500
Changeset:	9936d99fb63d45007628e1dcb74ce09e21cb4d70

Modified Files:
	fastahack/Makefile
	fastahack/distinfo
Added Files:
	fastahack/files/Makefile

Log Message:
fastahack: use upstream & our Makefile

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=9936d99fb63d45007628e1dcb74ce09e21cb4d70

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 fastahack/Makefile       |  9 +++----
 fastahack/distinfo       |  8 +++----
 fastahack/files/Makefile | 62 ++++++++++++++++++++++++++++++++++++++++++++++++
 3 files changed, 71 insertions(+), 8 deletions(-)

diffs:
diff --git a/fastahack/Makefile b/fastahack/Makefile
index 9999071512..553f260004 100644
--- a/fastahack/Makefile
+++ b/fastahack/Makefile
@@ -4,10 +4,10 @@
 #               Generated by fbsd2pkg                     #
 ###########################################################
 
-DISTNAME=	fastahack-${PORTVERSION}
+DISTNAME=	fastahack-0.0.0.20160702
 CATEGORIES=	biology
-MASTER_SITES=	${MASTER_SITE_GITHUB:=outpaddling/}
-GITHUB_TAG=	${PORTVERSION}
+MASTER_SITES=	${MASTER_SITE_GITHUB:=ekg/}
+GITHUB_TAG=	bbc645f2f7966cb7b44446200c02627c3168b399
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	https://github.com/ekg/fastahack
@@ -21,6 +21,7 @@ LICENSE=	gnu-gpl-v2
 USE_LANGUAGES=	c c++
 INSTALL_TARGET=	install-strip
 
-PORTVERSION=	18ed4b86ef962fa1b40f89b78625b2f271d9b155
+pre-configure:
+	${CP} ${FILESDIR}/Makefile ${WRKSRC}
 
 .include "../../mk/bsd.pkg.mk"
diff --git a/fastahack/distinfo b/fastahack/distinfo
index 5327545355..75942c1a78 100644
--- a/fastahack/distinfo
+++ b/fastahack/distinfo
@@ -1,6 +1,6 @@
 $NetBSD$
 
-SHA1 (fastahack-18ed4b86ef962fa1b40f89b78625b2f271d9b155-18ed4b86ef962fa1b40f89b78625b2f271d9b155.tar.gz) = 62184e06d5d76e795987ca8910635bf9c44da2be
-RMD160 (fastahack-18ed4b86ef962fa1b40f89b78625b2f271d9b155-18ed4b86ef962fa1b40f89b78625b2f271d9b155.tar.gz) = 8705c9e1d359d872b4c1955ab454eaf107a2d408
-SHA512 (fastahack-18ed4b86ef962fa1b40f89b78625b2f271d9b155-18ed4b86ef962fa1b40f89b78625b2f271d9b155.tar.gz) = 28012a0c4acd406b3e982b61f9096fc1068f2e8a6b65a27dc4050b83251cdddddf3fe2e0ad7862b761aa78f81f850504347b5781fb567491388446646e8ba067
-Size (fastahack-18ed4b86ef962fa1b40f89b78625b2f271d9b155-18ed4b86ef962fa1b40f89b78625b2f271d9b155.tar.gz) = 17724 bytes
+SHA1 (fastahack-0.0.0.20160702-bbc645f2f7966cb7b44446200c02627c3168b399.tar.gz) = 540817aa0386a0e96fecc07de6d9eb9428305a0f
+RMD160 (fastahack-0.0.0.20160702-bbc645f2f7966cb7b44446200c02627c3168b399.tar.gz) = 8cec082f7d6507ce5000bc41cdbd4cd4c05d9250
+SHA512 (fastahack-0.0.0.20160702-bbc645f2f7966cb7b44446200c02627c3168b399.tar.gz) = b61ee3a5daec634cfb5f4881eedf0b5805ef20f1f833cd7aad9ecc1b1b527a81c92df30f06848857bf16b580d610fe51f7644ea4a94571cea7bc302561d3c60d
+Size (fastahack-0.0.0.20160702-bbc645f2f7966cb7b44446200c02627c3168b399.tar.gz) = 18200 bytes
diff --git a/fastahack/files/Makefile b/fastahack/files/Makefile
new file mode 100644
index 0000000000..1082c33f97
--- /dev/null
+++ b/fastahack/files/Makefile
@@ -0,0 +1,62 @@
+
+# Use ?= to allow overriding from the env or command-line, e.g.
+#
+#	make CXXFLAGS="-O3 -fPIC" install
+#
+# Package managers will override many of these variables automatically, so
+# this is aimed at making it easy to create packages (Debian packages,
+# FreeBSD ports, MacPorts, pkgsrc, etc.)
+
+CXX ?=		c++
+CXXFLAGS ?=	-O3
+DESTDIR ?=	stage
+PREFIX ?=	/usr/local
+STRIP ?=	strip
+INSTALL ?=	install -c
+MKDIR ?=	mkdir -p
+AR ?=		ar
+
+# Required flags that we shouldn't override
+# Must be compiler-independent
+CXXFLAGS +=	-D_FILE_OFFSET_BITS=64
+
+BIN =	fastahack
+LIB =	libfastahack.a
+OBJS =	Fasta.o split.o disorder.o
+MAIN =	FastaHack.o
+
+all:	$(BIN) $(LIB)
+
+$(BIN): $(OBJS) $(MAIN)
+	$(CXX) $(CXXFLAGS) $(OBJS) $(MAIN) -o $(BIN)
+
+$(LIB): $(OBJS)
+	$(AR) -rs $(LIB) $(OBJS)
+
+FastaHack.o: Fasta.h FastaHack.cpp
+	$(CXX) $(CXXFLAGS) -c FastaHack.cpp
+
+Fasta.o: Fasta.h Fasta.cpp
+	$(CXX) $(CXXFLAGS) -c Fasta.cpp
+
+split.o: split.h split.cpp
+	$(CXX) $(CXXFLAGS) -c split.cpp
+
+disorder.o: disorder.c disorder.h
+	$(CXX) $(CXXFLAGS) -c disorder.c
+
+install: all
+	$(MKDIR) $(DESTDIR)$(PREFIX)/bin
+	$(MKDIR) $(DESTDIR)$(PREFIX)/include/fastahack
+	$(MKDIR) $(DESTDIR)$(PREFIX)/lib
+	$(INSTALL) $(BIN) $(DESTDIR)$(PREFIX)/bin
+	$(INSTALL) -m644 *.h $(DESTDIR)$(PREFIX)/include/fastahack
+	$(INSTALL) -m644 $(LIB) $(DESTDIR)$(PREFIX)/lib
+
+install-strip: install
+	$(STRIP) $(DESTDIR)$(PREFIX)/bin/$(BIN)
+
+clean:
+	rm -rf $(BIN) $(LIB) $(OBJS) $(DESTDIR)
+
+.PHONY: clean