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trimmomatic: Note failure to check for java depend
Module Name: pkgsrc-wip
Committed By: Jason W Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sun Apr 15 09:27:57 2018 -0500
Changeset: 5fec770c97dd0930c481712950277659cf48f450
Modified Files:
trimmomatic/Makefile
Log Message:
trimmomatic: Note failure to check for java depend
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=5fec770c97dd0930c481712950277659cf48f450
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
trimmomatic/Makefile | 1 +
1 file changed, 1 insertion(+)
diffs:
diff --git a/trimmomatic/Makefile b/trimmomatic/Makefile
index 9d31a7eefc..13ed44ff7a 100644
--- a/trimmomatic/Makefile
+++ b/trimmomatic/Makefile
@@ -14,6 +14,7 @@ HOMEPAGE= http://www.usadellab.org/cms/?page=trimmomatic
COMMENT= Flexible read trimming tool for Illumina NGS data
LICENSE= gnu-gpl-v3
+# FIXME: Should at least error out if no jvm available on Linux
USE_JAVA= run
USE_TOOLS+= pax
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