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hisat2: Respect LDFLAGS
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sun Jan 13 18:26:40 2019 -0600
Changeset: f980cc8f287bce4f1bb0410fd371038ccc4b42dd
Modified Files:
hisat2/files/Makefile.pkg
Log Message:
hisat2: Respect LDFLAGS
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=f980cc8f287bce4f1bb0410fd371038ccc4b42dd
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
hisat2/files/Makefile.pkg | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diffs:
diff --git a/hisat2/files/Makefile.pkg b/hisat2/files/Makefile.pkg
index 451fd441c7..baff77b98c 100644
--- a/hisat2/files/Makefile.pkg
+++ b/hisat2/files/Makefile.pkg
@@ -75,7 +75,7 @@ ifeq (1,$(USE_SRA))
SEARCH_LIBS += -L$(NCBI_NGS_DIR)/lib64 -L$(NCBI_VDB_DIR)/lib64
endif
-LIBS = $(PTHREAD_LIB)
+LIBS = $(PTHREAD_LIB) $(LDFLAGS)
SHARED_CPPS = ccnt_lut.cpp ref_read.cpp alphabet.cpp shmem.cpp \
edit.cpp gfm.cpp \
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