fastp: Clean up

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Fri May 3 11:37:57 2019 -0500
Changeset:	557b66a67fe4bd5b0500ffe990c0c5ba503164fc

Modified Files:
	fastp/Makefile
	fastp/distinfo
	fastp/patches/patch-Makefile
Removed Files:
	fastp/TODO

Log Message:
fastp: Clean up

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=557b66a67fe4bd5b0500ffe990c0c5ba503164fc

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 fastp/Makefile               | 12 +++++++-----
 fastp/TODO                   |  2 --
 fastp/distinfo               |  2 +-
 fastp/patches/patch-Makefile |  5 +++--
 4 files changed, 11 insertions(+), 10 deletions(-)

diffs:
diff --git a/fastp/Makefile b/fastp/Makefile
index 22a4fe75c7..2d41ef3aba 100644
--- a/fastp/Makefile
+++ b/fastp/Makefile
@@ -4,17 +4,19 @@ DISTNAME=	fastp-0.20.0
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=OpenGene/}
 GITHUB_PROJECT=	fastp
-GITHUB_TAG=	v0.20.0
+GITHUB_TAG=	v${PKGVERSION_NOREV}
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	https://github.com/OpenGene/fastp
 COMMENT=	Ultra-fast all-in-one FASTQ preprocessor
 LICENSE=	mit
 
-USE_LANGUAGES=	c c++
-USE_TOOLS+=	gmake
-BUILD_TARGET=	fastp
-INSTALL_TARGET=	install-strip
+USE_LANGUAGES=		c c++
+USE_TOOLS+=		gmake
+BUILD_TARGET=		fastp
+PTHREAD_AUTO_VARS=	yes
+INSTALL_TARGET=		install-strip
 
 .include "../../devel/zlib/buildlink3.mk"
+.include "../../mk/pthread.buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"
diff --git a/fastp/TODO b/fastp/TODO
deleted file mode 100644
index d15f150c9a..0000000000
--- a/fastp/TODO
+++ /dev/null
@@ -1,2 +0,0 @@
-
-Missing -L flags on NetBSD
diff --git a/fastp/distinfo b/fastp/distinfo
index 2bdb3626f2..15a6132328 100644
--- a/fastp/distinfo
+++ b/fastp/distinfo
@@ -4,4 +4,4 @@ SHA1 (fastp-0.20.0.tar.gz) = 657888d18b40aa18aa6d68e31a5e930ae8cf1606
 RMD160 (fastp-0.20.0.tar.gz) = 0ad6a0eb389e31855f1fa95a089aaa653164f88e
 SHA512 (fastp-0.20.0.tar.gz) = 33349b761283a42fb9eaf045ab7f839d5ec335fb394e277519b87f8c95cf682027ab183b174a1b82d908a3e4d1d65ac63a88c30efea04d93a08f559c1a7a732c
 Size (fastp-0.20.0.tar.gz) = 139422 bytes
-SHA1 (patch-Makefile) = b250f1916795cd5bd5244a297be4f4dd7a7c94f2
+SHA1 (patch-Makefile) = 38b5f2bb400cb6b8a962126e1ad1887fc8a5990e
diff --git a/fastp/patches/patch-Makefile b/fastp/patches/patch-Makefile
index fc822bea7f..323e3d0ed4 100644
--- a/fastp/patches/patch-Makefile
+++ b/fastp/patches/patch-Makefile
@@ -21,10 +21,11 @@ $NetBSD$
  
  CXX ?= g++
 -CXXFLAGS := -std=c++11 -g -O3 -I${DIR_INC} $(foreach includedir,$(INCLUDE_DIRS),-I$(includedir)) ${CXXFLAGS}
+-LIBS := -lz -lpthread
+-LD_FLAGS := $(foreach librarydir,$(LIBRARY_DIRS),-L$(librarydir)) $(LIBS) $(LD_FLAGS)
 +CXXFLAGS ?= -g -O3
 +CXXFLAGS += -std=c++11 -I${DIR_INC} $(foreach includedir,$(INCLUDE_DIRS),-I$(includedir))
- LIBS := -lz -lpthread
--LD_FLAGS := $(foreach librarydir,$(LIBRARY_DIRS),-L$(librarydir)) $(LIBS) $(LD_FLAGS)
++LIBS := -lz
 +LDFLAGS += $(foreach librarydir,$(LIBRARY_DIRS),-L$(librarydir)) $(LIBS)