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vsearch: Install PDF doc, more meaningful DESCR
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Thu May 9 16:43:50 2019 -0500
Changeset: 78902640278c05987848d0cdedeb32555c529be9
Modified Files:
vsearch/DESCR
vsearch/Makefile
vsearch/PLIST
Log Message:
vsearch: Install PDF doc, more meaningful DESCR
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=78902640278c05987848d0cdedeb32555c529be9
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
vsearch/DESCR | 11 ++++++++++-
vsearch/Makefile | 7 +------
vsearch/PLIST | 1 +
3 files changed, 12 insertions(+), 7 deletions(-)
diffs:
diff --git a/vsearch/DESCR b/vsearch/DESCR
index 2f422d319a..86302327f8 100644
--- a/vsearch/DESCR
+++ b/vsearch/DESCR
@@ -1 +1,10 @@
-Versatile open-source tool for metagenomics.
+VSEARCH supports de novo and reference based chimera detection, clustering,
+full-length and prefix dereplication, rereplication, reverse complementation,
+masking, all-vs-all pairwise global alignment, exact and global alignment
+searching, shuffling, subsampling and sorting. It also supports FASTQ file
+analysis, filtering, conversion and merging of paired-end reads.
+
+The aim of this project is to create an alternative to the USEARCH tool
+developed by Robert C. Edgar (2010).
+
+WWW: https://github.com/torognes/vsearch
diff --git a/vsearch/Makefile b/vsearch/Makefile
index 0ee27b2c3c..5b2322e736 100644
--- a/vsearch/Makefile
+++ b/vsearch/Makefile
@@ -1,9 +1,4 @@
# $NetBSD$
-#
-###########################################################
-# Generated by fbsd2pkg #
-# Fri May 20 17:39:48 CDT 2016 #
-###########################################################
DISTNAME= vsearch-2.13.3
CATEGORIES= biology
@@ -20,7 +15,7 @@ ONLY_FOR_PLATFORM= *-*-aarch64 *-*-powerpc64 *-*-x86_64
USE_LANGUAGES= c c++
USE_TOOLS+= autoconf automake autoreconf gmake
GNU_CONFIGURE= yes
-CONFIGURE_ARGS+= --disable-pdfman
+# CONFIGURE_ARGS+= --disable-pdfman
pre-configure:
cd ${WRKSRC} && autoreconf -fi
diff --git a/vsearch/PLIST b/vsearch/PLIST
index 5fccaabb18..a47b3a7d33 100644
--- a/vsearch/PLIST
+++ b/vsearch/PLIST
@@ -1,3 +1,4 @@
@comment $NetBSD$
bin/vsearch
man/man1/vsearch.1
+share/doc/vsearch/vsearch_manual.pdf
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