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fastqc: Specify java requirements
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Tue Jan 19 08:52:41 2021 -0600
Changeset: 0da615d92ad2bac7798c09d34fdaadfa61f3b24e
Modified Files:
fastqc/Makefile
Removed Files:
fastqc/TODO
Log Message:
fastqc: Specify java requirements
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=0da615d92ad2bac7798c09d34fdaadfa61f3b24e
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
fastqc/Makefile | 3 ++-
fastqc/TODO | 1 -
2 files changed, 2 insertions(+), 2 deletions(-)
diffs:
diff --git a/fastqc/Makefile b/fastqc/Makefile
index b2b1f4262d..2e3795880c 100644
--- a/fastqc/Makefile
+++ b/fastqc/Makefile
@@ -18,7 +18,8 @@ SUBST_SED.javapath+= -e 's|$$RealBin/|${JAVAJARDIR}/fastqc/|g'
SUBST_FILES.javapath+= fastqc
USE_TOOLS+= perl:run pax
-USE_JAVA= yes
+USE_JAVA= run
+USE_JAVA2= 8
WRKSRC= ${WRKDIR}/FastQC
REPLACE_PERL= fastqc
diff --git a/fastqc/TODO b/fastqc/TODO
deleted file mode 100644
index b687356e6b..0000000000
--- a/fastqc/TODO
+++ /dev/null
@@ -1 +0,0 @@
-Clean up and test
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