ncbi-blast+: Patch for NetBSD

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Thu Jun 10 16:38:05 2021 -0500
Changeset:	6c0ab362f00f2b9e9b17692d57f90505b87d10ab

Modified Files:
	ncbi-blast+/distinfo
Added Files:
	ncbi-blast+/patches/patch-src_build-system_configure

Log Message:
ncbi-blast+: Patch for NetBSD

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=6c0ab362f00f2b9e9b17692d57f90505b87d10ab

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 ncbi-blast+/distinfo                                 |  1 +
 ncbi-blast+/patches/patch-src_build-system_configure | 15 +++++++++++++++
 2 files changed, 16 insertions(+)

diffs:
diff --git a/ncbi-blast+/distinfo b/ncbi-blast+/distinfo
index 81d889a821..e30d21aca9 100644
--- a/ncbi-blast+/distinfo
+++ b/ncbi-blast+/distinfo
@@ -8,5 +8,6 @@ SHA1 (patch-compilers_xcode30__prj_configure) = b89b3be8671c6c692ba474476879ee67
 SHA1 (patch-src_algo_blast_core_blast__kappa.c) = 6fcad996b3a8e5b6c2400608bff9de62ebf6927f
 SHA1 (patch-src_build-system_Makefile.in.top) = 71d5246867a8c985c1175c338fb0af664094ca01
 SHA1 (patch-src_build-system_cmake_cmake-cfg-xcode.sh) = 9167a5092d30da46a06b0be05199afa3b08680c6
+SHA1 (patch-src_build-system_configure) = 95185d53179a69a1b1cfa6870aca36dd962d2c43
 SHA1 (patch-src_build-system_helpers_Makefile.run__with__lock.app) = d69b9e349646c970c3b296707f917defbe39cccd
 SHA1 (patch-src_util_checksum_farmhash_farmhash.h) = c3ff60de9a9020d3b706c2bff37f6f4cde4e6b6b
diff --git a/ncbi-blast+/patches/patch-src_build-system_configure b/ncbi-blast+/patches/patch-src_build-system_configure
new file mode 100644
index 0000000000..4dd4b0caee
--- /dev/null
+++ b/ncbi-blast+/patches/patch-src_build-system_configure
@@ -0,0 +1,15 @@
+$NetBSD$
+
+# Avert missing --with-libiconv-prefix option
+
+--- src/build-system/configure.orig	2021-06-10 19:44:11.069762486 +0000
++++ src/build-system/configure
+@@ -2015,7 +2015,7 @@ for x_arg in "$@" ; do
+       | --libdir=* | --includedir=* | --build=* | --host=* | --target=* \
+       | --mandir=* | --infodir=* | --docdir=* | --htmldir=* \
+       | --datadir=* | --sysconfdir=* | --localstatedir=* \
+-      | --with-runpath=* | --with-relative-runpath=* \
++      | --with-runpath=* | --with-relative-runpath=* | --with-libiconv-prefix=* \
+       | --with-experimental=* | --with-extra-action=* | --with-build-root=* \
+       | --with-fake-root=* | --with-build-root-sfx=* | --with-check=* \
+       | --with-check-tools=* | --with-ftds=[0-9]* | --with-fastcgi=[0-9]* \