wip/gemma: attempt to fix it up for BLAS_C_INTERFACE

[Dr. Thomas Orgis <thomas.orgis%uni-hamburg.de@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Dr. Thomas Orgis <thomas.orgis%uni-hamburg.de@localhost>
Pushed By:	thor
Date:		Tue Jun 15 09:45:25 2021 +0200
Changeset:	0181a41520d2c6c53c36fb2befa0e0e8779d0ff8

Modified Files:
	gemma/Makefile

Log Message:
wip/gemma: attempt to fix it up for BLAS_C_INTERFACE

… but failing to do so, properly. There is header conflict between gsl
and our cblas.h. This insane package combines gsl, BLAS _and_ eigen3?!

I hope Jason can fix it up.

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=0181a41520d2c6c53c36fb2befa0e0e8779d0ff8

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 gemma/Makefile | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

diffs:
diff --git a/gemma/Makefile b/gemma/Makefile
index 72dda89ef7..97ab16a4cb 100644
--- a/gemma/Makefile
+++ b/gemma/Makefile
@@ -21,7 +21,7 @@ USE_TOOLS+=	gmake perl
 
 CXXFLAGS+=	-I${PREFIX}/include/eigen3
 CXXFLAGS+=	-fpermissive
-MAKE_FLAGS+=	LDFLAGS+="${LAPACK_LIBS} -lgsl -lcblas -lz"
+MAKE_FLAGS+=	LDFLAGS+="${LAPACK_LIBS} -lgsl ${CBLAS_LIBS} -lz"
 MAKE_FILE=	${FILESDIR}/Makefile
 
 # Requires multithreading for decent performance
@@ -29,8 +29,11 @@ MAKE_FILE=	${FILESDIR}/Makefile
 # of math/cblas, if there were any.
 BLAS_ACCEPTED=	openblas_pthread openblas_openmp accelerate.framework
 
+BLAS_C_INTERFACE=	yes
+CXXFLAGS+=		${BLAS_INCLUDES}
+
 .if !empty(BLAS_TYPE:Mopenblas*)
-CXXFLAGS+=	-I${PREFIX}/include/${BLAS_TYPE} -DOPENBLAS
+CXXFLAGS+=	-DOPENBLAS
 .endif
 
 INSTALLATION_DIRS=	bin share/examples
@@ -39,7 +42,7 @@ do-test:
 	(cd ${WRKSRC}/test && ${SH} test_suite.sh)
 
 .include "../../devel/zlib/buildlink3.mk"
-.include "../../math/cblas/buildlink3.mk"
+.include "../../mk/blas.buildlink3.mk"
 .include "../../math/gsl/buildlink3.mk"
 .include "../../math/eigen3/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"