biolibc: Update to 0.1.3.63

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Tue Jul 27 10:53:25 2021 -0500
Changeset:	643d0a1bffdc548a921ec7c4aaa3380109131d8d

Modified Files:
	biolibc/Makefile
	biolibc/PLIST
	biolibc/buildlink3.mk
	biolibc/distinfo

Log Message:
biolibc: Update to 0.1.3.63

Add basic FASTA support

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=643d0a1bffdc548a921ec7c4aaa3380109131d8d

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 biolibc/Makefile      |  4 ++--
 biolibc/PLIST         | 31 +++++++++++++++++++++++++++++++
 biolibc/buildlink3.mk |  2 +-
 biolibc/distinfo      |  8 ++++----
 4 files changed, 38 insertions(+), 7 deletions(-)

diffs:
diff --git a/biolibc/Makefile b/biolibc/Makefile
index ee9b2cbb41..3e5e11d223 100644
--- a/biolibc/Makefile
+++ b/biolibc/Makefile
@@ -1,9 +1,9 @@
 # $NetBSD$
 
-DISTNAME=	biolibc-0.1.3.61
+DISTNAME=	biolibc-0.1.3.63
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=	40d7a8eab329743eecfd16669a14e962e79080ed
+GITHUB_TAG=	ca2a088c3a6c7ba47ca13002344d7934aa384392
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	https://github.com/auerlab/biolibc
diff --git a/biolibc/PLIST b/biolibc/PLIST
index 470555932a..f0b393d2a6 100644
--- a/biolibc/PLIST
+++ b/biolibc/PLIST
@@ -2,6 +2,7 @@
 include/biolibc/bed.h
 include/biolibc/biolibc.h
 include/biolibc/biostring.h
+include/biolibc/fasta.h
 include/biolibc/gff.h
 include/biolibc/overlap.h
 include/biolibc/pos-list.h
@@ -53,6 +54,24 @@ ${PLIST.cs}man/man3/BL_BED_SET_THICK_START.3
 ${PLIST.cs}man/man3/BL_BED_STRAND.3
 ${PLIST.cs}man/man3/BL_BED_THICK_END.3
 ${PLIST.cs}man/man3/BL_BED_THICK_START.3
+${PLIST.cs}man/man3/BL_FASTA_DESC.3
+${PLIST.cs}man/man3/BL_FASTA_DESC_AE.3
+${PLIST.cs}man/man3/BL_FASTA_DESC_ARRAY_SIZE.3
+${PLIST.cs}man/man3/BL_FASTA_DESC_LEN.3
+${PLIST.cs}man/man3/BL_FASTA_SEQ.3
+${PLIST.cs}man/man3/BL_FASTA_SEQ_AE.3
+${PLIST.cs}man/man3/BL_FASTA_SEQ_ARRAY_SIZE.3
+${PLIST.cs}man/man3/BL_FASTA_SEQ_LEN.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC_AE.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC_ARRAY_SIZE.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC_CPY.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC_LEN.3
+${PLIST.cs}man/man3/BL_FASTA_SET_SEQ.3
+${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_AE.3
+${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_ARRAY_SIZE.3
+${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_CPY.3
+${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_LEN.3
 ${PLIST.cs}man/man3/BL_GFF_ATTRIBUTES.3
 ${PLIST.cs}man/man3/BL_GFF_ATTRIBUTES_AE.3
 ${PLIST.cs}man/man3/BL_GFF_END.3
@@ -305,6 +324,18 @@ man/man3/bl_bed_set_thick_start.3
 man/man3/bl_bed_skip_header.3
 man/man3/bl_bed_write.3
 man/man3/bl_chrom_name_cmp.3
+man/man3/bl_fasta_read.3
+man/man3/bl_fasta_set_desc.3
+man/man3/bl_fasta_set_desc_ae.3
+man/man3/bl_fasta_set_desc_array_size.3
+man/man3/bl_fasta_set_desc_cpy.3
+man/man3/bl_fasta_set_desc_len.3
+man/man3/bl_fasta_set_seq.3
+man/man3/bl_fasta_set_seq_ae.3
+man/man3/bl_fasta_set_seq_array_size.3
+man/man3/bl_fasta_set_seq_cpy.3
+man/man3/bl_fasta_set_seq_len.3
+man/man3/bl_fasta_write.3
 man/man3/bl_gff_read.3
 man/man3/bl_gff_set_attributes.3
 man/man3/bl_gff_set_attributes_ae.3
diff --git a/biolibc/buildlink3.mk b/biolibc/buildlink3.mk
index 71f8ed2a68..65f57f25f0 100644
--- a/biolibc/buildlink3.mk
+++ b/biolibc/buildlink3.mk
@@ -5,7 +5,7 @@ BUILDLINK_TREE+=	biolibc
 .if !defined(BIOLIBC_BUILDLINK3_MK)
 BIOLIBC_BUILDLINK3_MK:=
 
-BUILDLINK_API_DEPENDS.biolibc+=	biolibc>=0.1.3.58
+BUILDLINK_API_DEPENDS.biolibc+=	biolibc>=0.1.3.63
 BUILDLINK_PKGSRCDIR.biolibc?=	../../wip/biolibc
 .endif	# BIOLIBC_BUILDLINK3_MK
 
diff --git a/biolibc/distinfo b/biolibc/distinfo
index dc85c09b2a..92a41885d7 100644
--- a/biolibc/distinfo
+++ b/biolibc/distinfo
@@ -1,6 +1,6 @@
 $NetBSD$
 
-SHA1 (biolibc-0.1.3.61-40d7a8eab329743eecfd16669a14e962e79080ed.tar.gz) = f8541cf18cda967f32d78795268333bba9fcac88
-RMD160 (biolibc-0.1.3.61-40d7a8eab329743eecfd16669a14e962e79080ed.tar.gz) = 01f1400314503ac2200e9cd8a8a8bfd7378f189d
-SHA512 (biolibc-0.1.3.61-40d7a8eab329743eecfd16669a14e962e79080ed.tar.gz) = efd498b0c669e420204e539871b3e7af85d365cee414c55486c8c98fc1056140233d819989151af8ea044a844f43363413d30667291190fd8a8923f0677646e0
-Size (biolibc-0.1.3.61-40d7a8eab329743eecfd16669a14e962e79080ed.tar.gz) = 95268 bytes
+SHA1 (biolibc-0.1.3.63-ca2a088c3a6c7ba47ca13002344d7934aa384392.tar.gz) = 34692e2ffbd3596d35c7f39bb14fda4965b17710
+RMD160 (biolibc-0.1.3.63-ca2a088c3a6c7ba47ca13002344d7934aa384392.tar.gz) = 1e5d31f5097215b491da212f8227ffeb727c18c9
+SHA512 (biolibc-0.1.3.63-ca2a088c3a6c7ba47ca13002344d7934aa384392.tar.gz) = b11239f8a285d9e08f0c1c6cea03cac431b83ebc8f46d9b325205d871229848ece77447efb2b3f6c5d892557878e393d36f8d4af6601075cccb38ca90729e8b2
+Size (biolibc-0.1.3.63-ca2a088c3a6c7ba47ca13002344d7934aa384392.tar.gz) = 100607 bytes