biolibc: Update to 0.2.0.12

To: pkgsrc-wip-changes%NetBSD.org@localhost
Subject: biolibc: Update to 0.2.0.12
From: Jason Bacon <bacon%NetBSD.org@localhost>
Date: Sat, 18 Sep 2021 15:18:30 +0000
Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Sat Sep 18 10:18:30 2021 -0500
Changeset:	b059cf89e04a8ef1b2374eff1bdd8d065079d5bb

Modified Files:
	biolibc/Makefile
	biolibc/PLIST
	biolibc/distinfo

Log Message:
biolibc: Update to 0.2.0.12

Install accessor macros even on case-insensitive FSs

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=b059cf89e04a8ef1b2374eff1bdd8d065079d5bb

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 biolibc/Makefile |   4 +-
 biolibc/PLIST    | 287 ++++++++++++++++++++++++++++---------------------------
 biolibc/distinfo |   8 +-
 3 files changed, 150 insertions(+), 149 deletions(-)

diffs:
diff --git a/biolibc/Makefile b/biolibc/Makefile
index ba2a403c9d..a0d2edd2bb 100644
--- a/biolibc/Makefile
+++ b/biolibc/Makefile
@@ -1,9 +1,9 @@
 # $NetBSD$
 
-DISTNAME=	biolibc-0.2.0.11
+DISTNAME=	biolibc-0.2.0.12
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=	65b3b132c813bb04b3a9886d08f51af8137a60e6
+GITHUB_TAG=	7e595c343a72c6973bfc45acd9d027e35b60e908
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	https://github.com/auerlab/biolibc
diff --git a/biolibc/PLIST b/biolibc/PLIST
index 8620330f6f..8d00613f63 100644
--- a/biolibc/PLIST
+++ b/biolibc/PLIST
@@ -15,21 +15,21 @@ lib/libbiolibc.a
 lib/libbiolibc.so
 lib/libbiolibc.so.2
 lib/libbiolibc.so.2.0
-${PLIST.cs}man/man3/BL_BED_BLOCK_COUNT.3
-${PLIST.cs}man/man3/BL_BED_BLOCK_SIZES.3
-${PLIST.cs}man/man3/BL_BED_BLOCK_SIZES_AE.3
-${PLIST.cs}man/man3/BL_BED_BLOCK_STARTS.3
-${PLIST.cs}man/man3/BL_BED_BLOCK_STARTS_AE.3
-${PLIST.cs}man/man3/BL_BED_CHROM.3
-${PLIST.cs}man/man3/BL_BED_CHROM_AE.3
-${PLIST.cs}man/man3/BL_BED_CHROM_END.3
-${PLIST.cs}man/man3/BL_BED_CHROM_START.3
-${PLIST.cs}man/man3/BL_BED_FIELDS.3
-${PLIST.cs}man/man3/BL_BED_ITEM_RGB.3
-${PLIST.cs}man/man3/BL_BED_ITEM_RGB_AE.3
-${PLIST.cs}man/man3/BL_BED_NAME.3
-${PLIST.cs}man/man3/BL_BED_NAME_AE.3
-${PLIST.cs}man/man3/BL_BED_SCORE.3
+man/man3/BL_BED_BLOCK_COUNT.3
+man/man3/BL_BED_BLOCK_SIZES.3
+man/man3/BL_BED_BLOCK_SIZES_AE.3
+man/man3/BL_BED_BLOCK_STARTS.3
+man/man3/BL_BED_BLOCK_STARTS_AE.3
+man/man3/BL_BED_CHROM.3
+man/man3/BL_BED_CHROM_AE.3
+man/man3/BL_BED_CHROM_END.3
+man/man3/BL_BED_CHROM_START.3
+man/man3/BL_BED_FIELDS.3
+man/man3/BL_BED_ITEM_RGB.3
+man/man3/BL_BED_ITEM_RGB_AE.3
+man/man3/BL_BED_NAME.3
+man/man3/BL_BED_NAME_AE.3
+man/man3/BL_BED_SCORE.3
 ${PLIST.cs}man/man3/BL_BED_SET_BLOCK_COUNT.3
 ${PLIST.cs}man/man3/BL_BED_SET_BLOCK_SIZES.3
 ${PLIST.cs}man/man3/BL_BED_SET_BLOCK_SIZES_AE.3
@@ -53,17 +53,18 @@ ${PLIST.cs}man/man3/BL_BED_SET_SCORE.3
 ${PLIST.cs}man/man3/BL_BED_SET_STRAND.3
 ${PLIST.cs}man/man3/BL_BED_SET_THICK_END.3
 ${PLIST.cs}man/man3/BL_BED_SET_THICK_START.3
-${PLIST.cs}man/man3/BL_BED_STRAND.3
-${PLIST.cs}man/man3/BL_BED_THICK_END.3
-${PLIST.cs}man/man3/BL_BED_THICK_START.3
-${PLIST.cs}man/man3/BL_FASTA_DESC.3
-${PLIST.cs}man/man3/BL_FASTA_DESC_AE.3
-${PLIST.cs}man/man3/BL_FASTA_DESC_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTA_DESC_LEN.3
-${PLIST.cs}man/man3/BL_FASTA_SEQ.3
-${PLIST.cs}man/man3/BL_FASTA_SEQ_AE.3
-${PLIST.cs}man/man3/BL_FASTA_SEQ_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTA_SEQ_LEN.3
+man/man3/BL_BED_STRAND.3
+man/man3/BL_BED_THICK_END.3
+man/man3/BL_BED_THICK_START.3
+man/man3/BL_FASTA_DESC.3
+man/man3/BL_FASTA_DESC_AE.3
+man/man3/BL_FASTA_DESC_ARRAY_SIZE.3
+man/man3/BL_FASTA_DESC_LEN.3
+man/man3/BL_FASTA_SEQ.3
+man/man3/BL_FASTA_SEQ_AE.3
+man/man3/BL_FASTA_SEQ_ARRAY_SIZE.3
+man/man3/BL_FASTA_SEQ_LEN.3
+${PLIST.cs}man/man3/BL_FASTA_SET_DESC.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_DESC.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_DESC_AE.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_DESC_ARRAY_SIZE.3
@@ -74,22 +75,22 @@ ${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_AE.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_ARRAY_SIZE.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_CPY.3
 ${PLIST.cs}man/man3/BL_FASTA_SET_SEQ_LEN.3
-${PLIST.cs}man/man3/BL_FASTQ_DESC.3
-${PLIST.cs}man/man3/BL_FASTQ_DESC_AE.3
-${PLIST.cs}man/man3/BL_FASTQ_DESC_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTQ_DESC_LEN.3
-${PLIST.cs}man/man3/BL_FASTQ_PLUS.3
-${PLIST.cs}man/man3/BL_FASTQ_PLUS_AE.3
-${PLIST.cs}man/man3/BL_FASTQ_PLUS_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTQ_PLUS_LEN.3
-${PLIST.cs}man/man3/BL_FASTQ_QUAL.3
-${PLIST.cs}man/man3/BL_FASTQ_QUAL_AE.3
-${PLIST.cs}man/man3/BL_FASTQ_QUAL_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTQ_QUAL_LEN.3
-${PLIST.cs}man/man3/BL_FASTQ_SEQ.3
-${PLIST.cs}man/man3/BL_FASTQ_SEQ_AE.3
-${PLIST.cs}man/man3/BL_FASTQ_SEQ_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_FASTQ_SEQ_LEN.3
+man/man3/BL_FASTQ_DESC.3
+man/man3/BL_FASTQ_DESC_AE.3
+man/man3/BL_FASTQ_DESC_ARRAY_SIZE.3
+man/man3/BL_FASTQ_DESC_LEN.3
+man/man3/BL_FASTQ_PLUS.3
+man/man3/BL_FASTQ_PLUS_AE.3
+man/man3/BL_FASTQ_PLUS_ARRAY_SIZE.3
+man/man3/BL_FASTQ_PLUS_LEN.3
+man/man3/BL_FASTQ_QUAL.3
+man/man3/BL_FASTQ_QUAL_AE.3
+man/man3/BL_FASTQ_QUAL_ARRAY_SIZE.3
+man/man3/BL_FASTQ_QUAL_LEN.3
+man/man3/BL_FASTQ_SEQ.3
+man/man3/BL_FASTQ_SEQ_AE.3
+man/man3/BL_FASTQ_SEQ_ARRAY_SIZE.3
+man/man3/BL_FASTQ_SEQ_LEN.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_DESC.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_DESC_AE.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_DESC_ARRAY_SIZE.3
@@ -110,19 +111,19 @@ ${PLIST.cs}man/man3/BL_FASTQ_SET_SEQ_AE.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_SEQ_ARRAY_SIZE.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_SEQ_CPY.3
 ${PLIST.cs}man/man3/BL_FASTQ_SET_SEQ_LEN.3
-${PLIST.cs}man/man3/BL_GFF_ATTRIBUTES.3
-${PLIST.cs}man/man3/BL_GFF_ATTRIBUTES_AE.3
-${PLIST.cs}man/man3/BL_GFF_END.3
-${PLIST.cs}man/man3/BL_GFF_FEATURE.3
-${PLIST.cs}man/man3/BL_GFF_FEATURE_AE.3
-${PLIST.cs}man/man3/BL_GFF_FEATURE_ID.3
-${PLIST.cs}man/man3/BL_GFF_FEATURE_ID_AE.3
-${PLIST.cs}man/man3/BL_GFF_GENE_NAME.3
-${PLIST.cs}man/man3/BL_GFF_GENE_NAME_AE.3
-${PLIST.cs}man/man3/BL_GFF_PHASE.3
-${PLIST.cs}man/man3/BL_GFF_SCORE.3
-${PLIST.cs}man/man3/BL_GFF_SEQUENCE.3
-${PLIST.cs}man/man3/BL_GFF_SEQUENCE_AE.3
+man/man3/BL_GFF_ATTRIBUTES.3
+man/man3/BL_GFF_ATTRIBUTES_AE.3
+man/man3/BL_GFF_END.3
+man/man3/BL_GFF_FEATURE.3
+man/man3/BL_GFF_FEATURE_AE.3
+man/man3/BL_GFF_FEATURE_ID.3
+man/man3/BL_GFF_FEATURE_ID_AE.3
+man/man3/BL_GFF_GENE_NAME.3
+man/man3/BL_GFF_GENE_NAME_AE.3
+man/man3/BL_GFF_PHASE.3
+man/man3/BL_GFF_SCORE.3
+man/man3/BL_GFF_SEQUENCE.3
+man/man3/BL_GFF_SEQUENCE_AE.3
 ${PLIST.cs}man/man3/BL_GFF_SET_ATTRIBUTES.3
 ${PLIST.cs}man/man3/BL_GFF_SET_ATTRIBUTES_AE.3
 ${PLIST.cs}man/man3/BL_GFF_SET_ATTRIBUTES_CPY.3
@@ -146,50 +147,50 @@ ${PLIST.cs}man/man3/BL_GFF_SET_SOURCE_AE.3
 ${PLIST.cs}man/man3/BL_GFF_SET_SOURCE_CPY.3
 ${PLIST.cs}man/man3/BL_GFF_SET_START.3
 ${PLIST.cs}man/man3/BL_GFF_SET_STRAND.3
-${PLIST.cs}man/man3/BL_GFF_SOURCE.3
-${PLIST.cs}man/man3/BL_GFF_SOURCE_AE.3
-${PLIST.cs}man/man3/BL_GFF_START.3
-${PLIST.cs}man/man3/BL_GFF_STRAND.3
-${PLIST.cs}man/man3/BL_OVERLAP_FEATURE1_LEN.3
-${PLIST.cs}man/man3/BL_OVERLAP_FEATURE2_LEN.3
-${PLIST.cs}man/man3/BL_OVERLAP_OVERLAP_END.3
-${PLIST.cs}man/man3/BL_OVERLAP_OVERLAP_LEN.3
-${PLIST.cs}man/man3/BL_OVERLAP_OVERLAP_START.3
+man/man3/BL_GFF_SOURCE.3
+man/man3/BL_GFF_SOURCE_AE.3
+man/man3/BL_GFF_START.3
+man/man3/BL_GFF_STRAND.3
+man/man3/BL_OVERLAP_FEATURE1_LEN.3
+man/man3/BL_OVERLAP_FEATURE2_LEN.3
+man/man3/BL_OVERLAP_OVERLAP_END.3
+man/man3/BL_OVERLAP_OVERLAP_LEN.3
+man/man3/BL_OVERLAP_OVERLAP_START.3
 ${PLIST.cs}man/man3/BL_OVERLAP_SET_FEATURE1_LEN.3
 ${PLIST.cs}man/man3/BL_OVERLAP_SET_FEATURE2_LEN.3
 ${PLIST.cs}man/man3/BL_OVERLAP_SET_OVERLAP_END.3
 ${PLIST.cs}man/man3/BL_OVERLAP_SET_OVERLAP_LEN.3
 ${PLIST.cs}man/man3/BL_OVERLAP_SET_OVERLAP_START.3
-${PLIST.cs}man/man3/BL_POS_LIST_ARRAY_SIZE.3
-${PLIST.cs}man/man3/BL_POS_LIST_COUNT.3
-${PLIST.cs}man/man3/BL_POS_LIST_POSITIONS.3
-${PLIST.cs}man/man3/BL_POS_LIST_POSITIONS_AE.3
+man/man3/BL_POS_LIST_ARRAY_SIZE.3
+man/man3/BL_POS_LIST_COUNT.3
+man/man3/BL_POS_LIST_POSITIONS.3
+man/man3/BL_POS_LIST_POSITIONS_AE.3
 ${PLIST.cs}man/man3/BL_POS_LIST_SET_ARRAY_SIZE.3
 ${PLIST.cs}man/man3/BL_POS_LIST_SET_COUNT.3
 ${PLIST.cs}man/man3/BL_POS_LIST_SET_POSITIONS.3
 ${PLIST.cs}man/man3/BL_POS_LIST_SET_POSITIONS_AE.3
 ${PLIST.cs}man/man3/BL_POS_LIST_SET_POSITIONS_CPY.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_ALIGNMENTS_AE.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_BUFFERED_COUNT.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_BUFF_SIZE.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_DISCARDED_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_DISCARDED_SCORE_SUM.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_DISCARDED_TRAILING.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_INC_DISCARDED_TRAILING.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_INC_TOTAL_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_INC_TRAILING_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAPQ_HIGH.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAPQ_LOW.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAPQ_MIN.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAPQ_SUM.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAX_COUNT.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MAX_DISCARDED_SCORE.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_MIN_DISCARDED_SCORE.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_PREVIOUS_POS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_PREVIOUS_RNAME.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_PREVIOUS_RNAME_AE.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_READS_USED.3
+man/man3/BL_SAM_BUFF_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_ALIGNMENTS_AE.3
+man/man3/BL_SAM_BUFF_BUFFERED_COUNT.3
+man/man3/BL_SAM_BUFF_BUFF_SIZE.3
+man/man3/BL_SAM_BUFF_DISCARDED_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_DISCARDED_SCORE_SUM.3
+man/man3/BL_SAM_BUFF_DISCARDED_TRAILING.3
+man/man3/BL_SAM_BUFF_INC_DISCARDED_TRAILING.3
+man/man3/BL_SAM_BUFF_INC_TOTAL_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_INC_TRAILING_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_MAPQ_HIGH.3
+man/man3/BL_SAM_BUFF_MAPQ_LOW.3
+man/man3/BL_SAM_BUFF_MAPQ_MIN.3
+man/man3/BL_SAM_BUFF_MAPQ_SUM.3
+man/man3/BL_SAM_BUFF_MAX_COUNT.3
+man/man3/BL_SAM_BUFF_MAX_DISCARDED_SCORE.3
+man/man3/BL_SAM_BUFF_MIN_DISCARDED_SCORE.3
+man/man3/BL_SAM_BUFF_PREVIOUS_POS.3
+man/man3/BL_SAM_BUFF_PREVIOUS_RNAME.3
+man/man3/BL_SAM_BUFF_PREVIOUS_RNAME_AE.3
+man/man3/BL_SAM_BUFF_READS_USED.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_ALIGNMENTS.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_ALIGNMENTS_AE.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_ALIGNMENTS_CPY.3
@@ -213,27 +214,27 @@ ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_READS_USED.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_TOTAL_ALIGNMENTS.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_TRAILING_ALIGNMENTS.3
 ${PLIST.cs}man/man3/BL_SAM_BUFF_SET_UNMAPPED_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_TOTAL_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_TRAILING_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_BUFF_UNMAPPED_ALIGNMENTS.3
-${PLIST.cs}man/man3/BL_SAM_CIGAR.3
-${PLIST.cs}man/man3/BL_SAM_CIGAR_AE.3
-${PLIST.cs}man/man3/BL_SAM_FLAG.3
-${PLIST.cs}man/man3/BL_SAM_MAPQ.3
-${PLIST.cs}man/man3/BL_SAM_PNEXT.3
-${PLIST.cs}man/man3/BL_SAM_POS.3
-${PLIST.cs}man/man3/BL_SAM_QNAME.3
-${PLIST.cs}man/man3/BL_SAM_QNAME_AE.3
-${PLIST.cs}man/man3/BL_SAM_QUAL.3
-${PLIST.cs}man/man3/BL_SAM_QUAL_AE.3
-${PLIST.cs}man/man3/BL_SAM_QUAL_LEN.3
-${PLIST.cs}man/man3/BL_SAM_RNAME.3
-${PLIST.cs}man/man3/BL_SAM_RNAME_AE.3
-${PLIST.cs}man/man3/BL_SAM_RNEXT.3
-${PLIST.cs}man/man3/BL_SAM_RNEXT_AE.3
-${PLIST.cs}man/man3/BL_SAM_SEQ.3
-${PLIST.cs}man/man3/BL_SAM_SEQ_AE.3
-${PLIST.cs}man/man3/BL_SAM_SEQ_LEN.3
+man/man3/BL_SAM_BUFF_TOTAL_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_TRAILING_ALIGNMENTS.3
+man/man3/BL_SAM_BUFF_UNMAPPED_ALIGNMENTS.3
+man/man3/BL_SAM_CIGAR.3
+man/man3/BL_SAM_CIGAR_AE.3
+man/man3/BL_SAM_FLAG.3
+man/man3/BL_SAM_MAPQ.3
+man/man3/BL_SAM_PNEXT.3
+man/man3/BL_SAM_POS.3
+man/man3/BL_SAM_QNAME.3
+man/man3/BL_SAM_QNAME_AE.3
+man/man3/BL_SAM_QUAL.3
+man/man3/BL_SAM_QUAL_AE.3
+man/man3/BL_SAM_QUAL_LEN.3
+man/man3/BL_SAM_RNAME.3
+man/man3/BL_SAM_RNAME_AE.3
+man/man3/BL_SAM_RNEXT.3
+man/man3/BL_SAM_RNEXT_AE.3
+man/man3/BL_SAM_SEQ.3
+man/man3/BL_SAM_SEQ_AE.3
+man/man3/BL_SAM_SEQ_LEN.3
 ${PLIST.cs}man/man3/BL_SAM_SET_CIGAR.3
 ${PLIST.cs}man/man3/BL_SAM_SET_CIGAR_AE.3
 ${PLIST.cs}man/man3/BL_SAM_SET_CIGAR_CPY.3
@@ -259,37 +260,37 @@ ${PLIST.cs}man/man3/BL_SAM_SET_SEQ_AE.3
 ${PLIST.cs}man/man3/BL_SAM_SET_SEQ_CPY.3
 ${PLIST.cs}man/man3/BL_SAM_SET_SEQ_LEN.3
 ${PLIST.cs}man/man3/BL_SAM_SET_TLEN.3
-${PLIST.cs}man/man3/BL_SAM_TLEN.3
-${PLIST.cs}man/man3/BL_VCF_ALT.3
-${PLIST.cs}man/man3/BL_VCF_ALT_AE.3
-${PLIST.cs}man/man3/BL_VCF_ALT_COUNT.3
-${PLIST.cs}man/man3/BL_VCF_CHROM.3
-${PLIST.cs}man/man3/BL_VCF_CHROM_AE.3
-${PLIST.cs}man/man3/BL_VCF_FILTER.3
-${PLIST.cs}man/man3/BL_VCF_FILTER_AE.3
-${PLIST.cs}man/man3/BL_VCF_FORMAT.3
-${PLIST.cs}man/man3/BL_VCF_FORMAT_AE.3
-${PLIST.cs}man/man3/BL_VCF_FORMAT_MAX.3
-${PLIST.cs}man/man3/BL_VCF_ID.3
-${PLIST.cs}man/man3/BL_VCF_ID_AE.3
-${PLIST.cs}man/man3/BL_VCF_INFO.3
-${PLIST.cs}man/man3/BL_VCF_INFO_AE.3
-${PLIST.cs}man/man3/BL_VCF_INFO_LEN.3
-${PLIST.cs}man/man3/BL_VCF_INFO_MAX.3
-${PLIST.cs}man/man3/BL_VCF_MULTI_SAMPLES.3
-${PLIST.cs}man/man3/BL_VCF_MULTI_SAMPLES_AE.3
-${PLIST.cs}man/man3/BL_VCF_OTHER_COUNT.3
-${PLIST.cs}man/man3/BL_VCF_PHREDS.3
-${PLIST.cs}man/man3/BL_VCF_PHREDS_AE.3
-${PLIST.cs}man/man3/BL_VCF_PHRED_BUFF_SIZE.3
-${PLIST.cs}man/man3/BL_VCF_PHRED_COUNT.3
-${PLIST.cs}man/man3/BL_VCF_POS.3
-${PLIST.cs}man/man3/BL_VCF_QUAL.3
-${PLIST.cs}man/man3/BL_VCF_QUAL_AE.3
-${PLIST.cs}man/man3/BL_VCF_REF.3
-${PLIST.cs}man/man3/BL_VCF_REF_AE.3
-${PLIST.cs}man/man3/BL_VCF_REF_COUNT.3
-${PLIST.cs}man/man3/BL_VCF_SAMPLE_MAX.3
+man/man3/BL_SAM_TLEN.3
+man/man3/BL_VCF_ALT.3
+man/man3/BL_VCF_ALT_AE.3
+man/man3/BL_VCF_ALT_COUNT.3
+man/man3/BL_VCF_CHROM.3
+man/man3/BL_VCF_CHROM_AE.3
+man/man3/BL_VCF_FILTER.3
+man/man3/BL_VCF_FILTER_AE.3
+man/man3/BL_VCF_FORMAT.3
+man/man3/BL_VCF_FORMAT_AE.3
+man/man3/BL_VCF_FORMAT_MAX.3
+man/man3/BL_VCF_ID.3
+man/man3/BL_VCF_ID_AE.3
+man/man3/BL_VCF_INFO.3
+man/man3/BL_VCF_INFO_AE.3
+man/man3/BL_VCF_INFO_LEN.3
+man/man3/BL_VCF_INFO_MAX.3
+man/man3/BL_VCF_MULTI_SAMPLES.3
+man/man3/BL_VCF_MULTI_SAMPLES_AE.3
+man/man3/BL_VCF_OTHER_COUNT.3
+man/man3/BL_VCF_PHREDS.3
+man/man3/BL_VCF_PHREDS_AE.3
+man/man3/BL_VCF_PHRED_BUFF_SIZE.3
+man/man3/BL_VCF_PHRED_COUNT.3
+man/man3/BL_VCF_POS.3
+man/man3/BL_VCF_QUAL.3
+man/man3/BL_VCF_QUAL_AE.3
+man/man3/BL_VCF_REF.3
+man/man3/BL_VCF_REF_AE.3
+man/man3/BL_VCF_REF_COUNT.3
+man/man3/BL_VCF_SAMPLE_MAX.3
 ${PLIST.cs}man/man3/BL_VCF_SET_ALT.3
 ${PLIST.cs}man/man3/BL_VCF_SET_ALT_AE.3
 ${PLIST.cs}man/man3/BL_VCF_SET_ALT_COUNT.3
@@ -333,8 +334,8 @@ ${PLIST.cs}man/man3/BL_VCF_SET_SAMPLE_MAX.3
 ${PLIST.cs}man/man3/BL_VCF_SET_SINGLE_SAMPLE.3
 ${PLIST.cs}man/man3/BL_VCF_SET_SINGLE_SAMPLE_AE.3
 ${PLIST.cs}man/man3/BL_VCF_SET_SINGLE_SAMPLE_CPY.3
-${PLIST.cs}man/man3/BL_VCF_SINGLE_SAMPLE.3
-${PLIST.cs}man/man3/BL_VCF_SINGLE_SAMPLE_AE.3
+man/man3/BL_VCF_SINGLE_SAMPLE.3
+man/man3/BL_VCF_SINGLE_SAMPLE_AE.3
 man/man3/biolibc.3
 man/man3/bl_bed_check_order.3
 man/man3/bl_bed_gff_cmp.3
diff --git a/biolibc/distinfo b/biolibc/distinfo
index b025bdaa44..9b085f10b2 100644
--- a/biolibc/distinfo
+++ b/biolibc/distinfo
@@ -1,6 +1,6 @@
 $NetBSD$
 
-SHA1 (biolibc-0.2.0.11-65b3b132c813bb04b3a9886d08f51af8137a60e6.tar.gz) = da2bbef25c506dd98c434a256f1b80851eaee4e7
-RMD160 (biolibc-0.2.0.11-65b3b132c813bb04b3a9886d08f51af8137a60e6.tar.gz) = da00377b8233f1b8c7d3d3382a4661b0a8230867
-SHA512 (biolibc-0.2.0.11-65b3b132c813bb04b3a9886d08f51af8137a60e6.tar.gz) = 2c63ceecc1a7ff1509ffe6791fdb42d1051e02bbf14cabb99f387289df9457629f8e4cc168d51527881c0cea2ad731c0250c3e320ed35bd2750cb9d2dcb1ade5
-Size (biolibc-0.2.0.11-65b3b132c813bb04b3a9886d08f51af8137a60e6.tar.gz) = 119372 bytes
+SHA1 (biolibc-0.2.0.12-7e595c343a72c6973bfc45acd9d027e35b60e908.tar.gz) = 60931845ab643fc83725cd4dafc0b5f4e3b0f5e7
+RMD160 (biolibc-0.2.0.12-7e595c343a72c6973bfc45acd9d027e35b60e908.tar.gz) = 22eadfdc87835e1e5a2be9571f59cc4be48627f9
+SHA512 (biolibc-0.2.0.12-7e595c343a72c6973bfc45acd9d027e35b60e908.tar.gz) = 4f854e4f7d3413c77ea5c19eb01128ae803f5a90d51d84d66f488ec9f2023a39036fb34d1c1f91ad5fa4e49ee554b08f39900856dde2eddef09f00e7a57b2616
+Size (biolibc-0.2.0.12-7e595c343a72c6973bfc45acd9d027e35b60e908.tar.gz) = 118946 bytes
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