microsynteny-tools: Update to 0.1.0.133

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Mon Apr 18 07:16:17 2022 -0500
Changeset:	ea97ecd67dd991d66c3211fd3ae57fefcd4144f1

Modified Files:
	microsynteny-tools/Makefile
	microsynteny-tools/PLIST
	microsynteny-tools/distinfo

Log Message:
microsynteny-tools: Update to 0.1.0.133

Add menu system and organize installation

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=ea97ecd67dd991d66c3211fd3ae57fefcd4144f1

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 microsynteny-tools/Makefile |  6 +++---
 microsynteny-tools/PLIST    | 14 ++++++++++++++
 microsynteny-tools/distinfo |  6 +++---
 3 files changed, 20 insertions(+), 6 deletions(-)

diffs:
diff --git a/microsynteny-tools/Makefile b/microsynteny-tools/Makefile
index b7b65253cb..56fde6f4ea 100644
--- a/microsynteny-tools/Makefile
+++ b/microsynteny-tools/Makefile
@@ -5,17 +5,17 @@
 #              Sun Mar  6 18:38:30 CST 2022               #
 ###########################################################
 
-DISTNAME=	microsynteny-tools-0.1.0.85
+DISTNAME=	microsynteny-tools-0.1.0.133
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=	0c4d9462cd481a40053550749372db951d2ca701
+GITHUB_TAG=	2d9e28c24f05adc221746039b1f2ce0fdd0e1823
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	https://github.com/auerlab/microsynteny-tools
 COMMENT=	Tools for exploring microsyntenic differences among species
 LICENSE=	2-clause-bsd
 
-REPLACE_PYTHON=	*.py
+REPLACE_PYTHON=	Scripts/*.py
 
 .include "../../wip/biolibc/buildlink3.mk"
 .include "../../lang/python/application.mk"
diff --git a/microsynteny-tools/PLIST b/microsynteny-tools/PLIST
index 8313b7f7d1..6fa7be58d2 100644
--- a/microsynteny-tools/PLIST
+++ b/microsynteny-tools/PLIST
@@ -1,8 +1,22 @@
 @comment $NetBSD$
+bin/add-ortho
+bin/ms-blast
+bin/ms-blast-dbs
 bin/ms-extract
+bin/ms-fish-mammal-intersect
+bin/ms-fish-mammal-percent-changed
+bin/ms-gene-list-extract
+bin/ms-gene-list-fish-mammal-intersect
+bin/ms-gene-list-stack
 bin/ms-intersect
+bin/ms-locate-gene
+bin/ms-menu
 bin/ms-plot
+bin/ms-plot.py
 bin/ms-stack
+bin/ms-stack.py
+libexec/blast-filter.awk
+libexec/conserved-stats.awk
 man/man1/ms-extract.1
 man/man1/ms-intersect.1
 man/man1/ms-plot.1
diff --git a/microsynteny-tools/distinfo b/microsynteny-tools/distinfo
index 88dc503e82..3319ffb60c 100644
--- a/microsynteny-tools/distinfo
+++ b/microsynteny-tools/distinfo
@@ -1,5 +1,5 @@
 $NetBSD$
 
-BLAKE2s (microsynteny-tools-0.1.0.85-0c4d9462cd481a40053550749372db951d2ca701.tar.gz) = d91a545484968a6f86935092a2ee7707f05f877109f52d83851d0b1b262a773a
-SHA512 (microsynteny-tools-0.1.0.85-0c4d9462cd481a40053550749372db951d2ca701.tar.gz) = ad4f024ee5d8981e689cab288c2b194d8b13e8d0d6c098865ee6bb5faed68f3fa8fc9a66fff556ec389f9d9a63cb3efbbf268d2dd5ac90b5f22a33d2fe570ade
-Size (microsynteny-tools-0.1.0.85-0c4d9462cd481a40053550749372db951d2ca701.tar.gz) = 540714 bytes
+BLAKE2s (microsynteny-tools-0.1.0.133-2d9e28c24f05adc221746039b1f2ce0fdd0e1823.tar.gz) = 48480d264f130def1bf01e506dc314e77341a526e5dee5a6f2cd8077a35e886b
+SHA512 (microsynteny-tools-0.1.0.133-2d9e28c24f05adc221746039b1f2ce0fdd0e1823.tar.gz) = e38738a2f03a8579b55bf5f0862de7534c44e2b3cad0821aa4751b0c32d7be6713acde302a2cbad888b97ad068f523dfdc6c22ede146c0f6004c3c366f1eebde
+Size (microsynteny-tools-0.1.0.133-2d9e28c24f05adc221746039b1f2ce0fdd0e1823.tar.gz) = 2163158 bytes