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rna-seq: Add webbrowser dep for viewing FastQC reports
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Thu Jan 19 08:42:30 2023 -0600
Changeset: 2292a9ed17640f1a7a23381218edc90dfc4a2382
Modified Files:
rna-seq/Makefile
Log Message:
rna-seq: Add webbrowser dep for viewing FastQC reports
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=2292a9ed17640f1a7a23381218edc90dfc4a2382
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
rna-seq/Makefile | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diffs:
diff --git a/rna-seq/Makefile b/rna-seq/Makefile
index 898d81eb41..2922ba70c5 100644
--- a/rna-seq/Makefile
+++ b/rna-seq/Makefile
@@ -8,15 +8,16 @@ MASTER_SITES= # empty
OWNER= bacon%NetBSD.org@localhost
COMMENT= Core tools needed for RNA-Seq analysis
-DEPENDS+= fastq-trim>=0:../../biology/fastq-trim
+DEPENDS+= fastq-trim>=0:../../wip/fastq-trim
DEPENDS+= fastqc>=0:../../biology/fastqc
-DEPENDS+= biolibc-tools>=0:../../biology/biolibc-tools
+DEPENDS+= biolibc-tools>=0:../../wip/biolibc-tools
DEPENDS+= gffread>=0:../../biology/gffread
DEPENDS+= kallisto>=0:../../biology/kallisto
DEPENDS+= hisat2>=0:../../biology/hisat2
DEPENDS+= samtools>=0:../../biology/samtools
DEPENDS+= igv>=0:../../biology/igv
-DEPENDS+= fasda>=0:../../biology/fasda
+DEPENDS+= fasda>=0:../../wip/fasda
+DEPENDS+= webbrowser>=0:../../wip/webbrowser
META_PACKAGE= yes
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