py-pysam/TODO: Add more debug info

[Jason W. Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Fri Jul 28 08:14:18 2023 -0500
Changeset:	85acdb805024ccdcd7a491e2b9f92507631a69a3

Modified Files:
	py-pysam/TODO

Log Message:
py-pysam/TODO: Add more debug info

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=85acdb805024ccdcd7a491e2b9f92507631a69a3

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 py-pysam/TODO | 10 ++++++++++
 1 file changed, 10 insertions(+)

diffs:
diff --git a/py-pysam/TODO b/py-pysam/TODO
index 07e5699e81..0aeffd286e 100644
--- a/py-pysam/TODO
+++ b/py-pysam/TODO
@@ -4,6 +4,16 @@ Same errors on NetBSD and Alma8:
 cc -shared -L. -Wl,-zrelro -Wl,-znow -L/usr/lib -Wl,-R/usr/lib -L/home/bacon/Pkgsrc/pkg/lib -Wl,-R/home/bacon/Pkgsrc/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -Wl,-zrelro -Wl,-znow -L/usr/lib -Wl,-R/usr/lib -L/home/bacon/Pkgsrc/pkg/lib -Wl,-R/home/bacon/Pkgsrc/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -Wl,-zrelro -Wl,-znow -L/usr/lib -Wl,-R/usr/lib -L/home/bacon/Pkgsrc/pkg/lib -Wl,-R/home/bacon/Pkgsrc/pkg/lib -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/include -I/home/bacon/Pkgsrc/pkg/include/python3.10 -I/home/bacon/Pkgsrc/pkg/include -I/usr/include -I/home/bacon/Pkgsrc/pkg/include/python3.10 -I/home/bacon/Pkgsrc/pkg/include build/temp.netbsd-9.3-amd64-cpython-310/pysam/libcsamfile.o -L/home/bacon/Pkgsrc/pkgsrc/wip/py-pysam/work/pysam-0.21.0/pysam -L/home/bacon/Pkgsrc/pkg/lib -Lbuild/lib.netbsd-9.3-amd64-cpython-310/pysam -Lbuild/lib.netbsd-9.3-amd64-cpython-310/pysam -Lbuild/lib.netbsd-9.3-amd64-cpython-310/pysam -Lbuild/lib.netbsd-9.3-amd64-cpython-310/pysam -Lbuild/lib.
netbsd-9.3-amd64-cpython-310/pysam -Lbuild/lib.netbsd-9.3-amd64-cpython-310/pysam -L/home/bacon/Pkgsrc/pkg/lib -lz -lhts -lchtslib -lcutils -o build/lib.netbsd-9.3-amd64-cpython-310/pysam/libcsamfile.so -Wl,-rpath,$ORIGIN
 ld: warning: libcsamtools.so, needed by build/lib.netbsd-9.3-amd64-cpython-310/pysam/libcutils.so, not found (try using -rpath or -rpath-link)
 ld: warning: libcbcftools.so, needed by build/lib.netbsd-9.3-amd64-cpython-310/pysam/libcutils.so, not found (try using -rpath or -rpath-link)
+[ same for numerous other libs ]
 
 # => Checking for missing run-time search paths in py310-pysam-0.21.0
 # ERROR: lib/python3.10/site-packages/pysam/libcalignedsegment.so: missing library: libchtslib.so
+[ same for numerous other libs ]
+
+NetBSD netbsd9.acadix  bacon ~/Pkgsrc/pkgsrc/wip/py-pysam 1004: (pkgsrc): find work/ -name libcsamtools.so
+work/pysam-0.21.0/build/lib.netbsd-9.3-amd64-cpython-310/pysam/libcsamtools.so
+work/.destdir/home/bacon/Pkgsrc/pkg/lib/python3.10/site-packages/pysam/libcsamtools.so
+
+NetBSD netbsd9.acadix  bacon ~/Pkgsrc/pkgsrc/wip/py-pysam 1006: (pkgsrc): find work/ -name libchtslib.so
+work/pysam-0.21.0/build/lib.netbsd-9.3-amd64-cpython-310/pysam/libchtslib.so
+work/.destdir/home/bacon/Pkgsrc/pkg/lib/python3.10/site-packages/pysam/libchtslib.so