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py-macs2: Clean up, move cythonize to pre-configure
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sat Dec 23 10:32:35 2023 -0600
Changeset: 9f362f6fbcbcd190c81ab6661cf278e4f7b6dc1f
Modified Files:
py-macs2/Makefile
Log Message:
py-macs2: Clean up, move cythonize to pre-configure
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=9f362f6fbcbcd190c81ab6661cf278e4f7b6dc1f
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
py-macs2/Makefile | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diffs:
diff --git a/py-macs2/Makefile b/py-macs2/Makefile
index b165f43857..20f7bf3f3b 100644
--- a/py-macs2/Makefile
+++ b/py-macs2/Makefile
@@ -12,8 +12,7 @@ HOMEPAGE= https://github.com/macs3-project/MACS
COMMENT= Algorithm for identifying transcription factor binding sites
LICENSE= modified-bsd
-# TOOL_DEPENDS+= ${PYPKGPREFIX}-cython-0.*:../../wip/py-cython-legacy
-TOOL_DEPENDS+= ${PYPKGPREFIX}-cython-3.*:../../devel/py-cython
+TOOL_DEPENDS+= ${PYPKGPREFIX}-cython-[0-9]*:../../devel/py-cython
# Requires new python features
PYTHON_VERSIONS_INCOMPATIBLE= 27 38
@@ -21,7 +20,7 @@ PYTHON_VERSIONS_INCOMPATIBLE= 27 38
CYTHONIZE= ${PREFIX}/bin/cythonize-${PYVERSSUFFIX}
# Distributed .c files do not support python > 3.9
-post-patch:
+pre-configure:
${MV} ${WRKSRC}/MACS2/cPosValCalculation.c ${WRKSRC}
${RM} -f ${WRKSRC}/MACS2/*.c ${WRKSRC}/MACS2/*/*.c
cd ${WRKSRC} && ${CYTHONIZE} ${WRKSRC}/MACS2/*.pyx
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