plink: Update to 1.9b6.17

[Jason W. Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Mon Dec 25 07:58:52 2023 -0600
Changeset:	e5e42ad8868530e9e82413e98c4f257c0b8356f3

Modified Files:
	plink/DESCR
	plink/Makefile
	plink/distinfo

Log Message:
plink: Update to 1.9b6.17

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=e5e42ad8868530e9e82413e98c4f257c0b8356f3

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 plink/DESCR    | 6 +++---
 plink/Makefile | 8 +++-----
 plink/distinfo | 6 +++---
 3 files changed, 9 insertions(+), 11 deletions(-)

diffs:
diff --git a/plink/DESCR b/plink/DESCR
index 8e4e62b399..fca8a130e0 100644
--- a/plink/DESCR
+++ b/plink/DESCR
@@ -1,3 +1,3 @@
-PLINK is a free, open-source whole genome association analysis toolset,
-designed to perform a range of basic, large-scale analyses in a
-computationally efficient manner.
+PLINK is a free, open-source whole genome association analysis
+toolset, designed to perform a range of basic, large-scale analyses
+in a computationally efficient manner.
diff --git a/plink/Makefile b/plink/Makefile
index 131118821c..16c3c47cfd 100644
--- a/plink/Makefile
+++ b/plink/Makefile
@@ -5,15 +5,14 @@
 #              Mon Aug 28 18:05:44 CDT 2017               #
 ###########################################################
 
-DISTNAME=	plink-${PORTVERSION}
-PKGREVISION=	1
+DISTNAME=	plink-1.9b6.17
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=chrchang/}
 GITHUB_PROJECT=	plink-ng
-GITHUB_TAG=	00aaeb53d3edd569c93bd60e7bcd27ced4cd8fdb
+GITHUB_TAG=	79b2df8cffce480148b7d2197e4981bfeff3a3c0
 
 MAINTAINER=	bacon%NetBSD.org@localhost
-#HOMEPAGE=	http://pngu.mgh.harvard.edu/~purcell/plink/
+HOMEPAGE=	https://www.cog-genomics.org/plink/
 COMMENT=	Whole genome association analysis toolset
 LICENSE=	gnu-gpl-v2
 
@@ -30,7 +29,6 @@ CXXFLAGS+=	-DDYNAMIC_ZLIB -I${PREFIX}/include ${BLAS_INCLUDES}
 MAKE_FLAGS+=	ZLIB=-lz BLASFLAGS="-L${PREFIX}/lib ${LAPACK_LIBS} ${CBLAS_LIBS}  -lpthread"
 INSTALL_TARGET=	install-strip
 
-PORTVERSION=	1.90b4
 BLAS_ACCEPTED=	openblas_pthread
 
 BLAS_C_INTERFACE=	yes
diff --git a/plink/distinfo b/plink/distinfo
index 056af372b2..c40cd7b3f5 100644
--- a/plink/distinfo
+++ b/plink/distinfo
@@ -1,5 +1,5 @@
 $NetBSD$
 
-RMD160 (plink-1.90b4-00aaeb53d3edd569c93bd60e7bcd27ced4cd8fdb.tar.gz) = e5ae2e4ec8a4685e0ab6e5afa6dff5c5ed0ddb36
-SHA512 (plink-1.90b4-00aaeb53d3edd569c93bd60e7bcd27ced4cd8fdb.tar.gz) = 48edbac63ebbaa1f7ee5bb287fbed43b4052c4e15a76fb2299a9dfe71a580feb6a10cf4da57d2b314af68dc1886d462476aa9d8a440c817e23be7f9a09729c65
-Size (plink-1.90b4-00aaeb53d3edd569c93bd60e7bcd27ced4cd8fdb.tar.gz) = 2566557 bytes
+BLAKE2s (plink-1.9b6.17-79b2df8cffce480148b7d2197e4981bfeff3a3c0.tar.gz) = 3c4201041b1dddd25cdb8460f92168b867383412a86d8d57fb04f0feeb42a94d
+SHA512 (plink-1.9b6.17-79b2df8cffce480148b7d2197e4981bfeff3a3c0.tar.gz) = c80092a40cdef65099a7d9cf673ce155b74b8233d4eb6496130d83e0d846d0e85656f0389fb083226393f80a0f31ca91bd3c8eae47dcc2fd4e897e5f80b523a6
+Size (plink-1.9b6.17-79b2df8cffce480148b7d2197e4981bfeff3a3c0.tar.gz) = 3015223 bytes