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bio-mocha: Sync deps with bcftools
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Fri Oct 11 17:01:35 2024 -0500
Changeset: 0ca35040f871a15c7353400063729c9cc2f48695
Modified Files:
bio-mocha/Makefile
Log Message:
bio-mocha: Sync deps with bcftools
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=0ca35040f871a15c7353400063729c9cc2f48695
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
bio-mocha/Makefile | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diffs:
diff --git a/bio-mocha/Makefile b/bio-mocha/Makefile
index 80bd4be290..e710aa1251 100644
--- a/bio-mocha/Makefile
+++ b/bio-mocha/Makefile
@@ -27,7 +27,7 @@ SUBST_FILES.version= configure.ac
DEPENDS= bash>=0:../../shells/bash
DEPENDS+= bcftools>=1.16:../../biology/bcftools
-USE_TOOLS+= autoconf automake autoreconf gmake perl pax
+USE_TOOLS+= autoconf automake autoreconf bash gmake perl pax
GNU_CONFIGURE= yes
REPLACE_PERL= misc/* test/test.pl
@@ -56,9 +56,10 @@ do-install:
(cd ${WRKSRC}/MoCha && pax -rw . ${DESTDIR}${DATADIR})
.include "../../devel/zlib/buildlink3.mk"
+.include "../../math/gsl/buildlink3.mk"
+.include "../../lang/python/application.mk"
+.include "../../wip/htslib/buildlink3.mk"
# Required for Linux, even though inherited from htslib
.include "../../archivers/bzip2/buildlink3.mk"
.include "../../archivers/xz/buildlink3.mk"
-.include "../../math/gsl/buildlink3.mk"
-.include "../../wip/htslib/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
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