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CVS commit: wip/glimmerm
- To: pkgsrc-wip-cvs%lists.sourceforge.net@localhost
- Subject: CVS commit: wip/glimmerm
- From: David <daprice%users.sourceforge.net@localhost>
- Date: Fri, 25 Feb 2005 13:41:33 -0800 See http://spamassassin.org/tag/ for more details. Report problems to http://sf.net/tracker/?func=add&group_id=1&atid=200001 -2.8 ALL_TRUSTED Did not pass through any untrusted hosts 0.0 SF_CHICKENPOX_PARATHESES_OPEN BODY: Text interparsed with ( 0.0 SF_CHICKENPOX_PERIOD BODY: Text interparsed with . 0.0 SF_CHICKENPOX_SLASH BODY: Text interparsed with / 0.0 SF_CHICKENPOX_MINUS BODY: Text interparsed with - 0.0 SF_CHICKENPOX_UNDERSCORE BODY: Text interparsed with _ 0.0 SF_CHICKENPOX_EQUAL BODY: Text interparsed with = 0.0 SF_CHICKENPOX_AT BODY: Text interparsed with @ -0.0 AWL AWL: From: address is in the auto white-list
Module name: pkgsrc-wip
Committed by: daprice
Date: Fri Feb 25 21:41:33 UTC 2005
Import into wip/glimmerm
Log Message:
A gene finder derived from Glimmer, but developed specifically for eukaryotes.
It is based on a dynamic programing algorithm that considers all combinations
of possible exons for inclusion in a gene model and chooses the best of these
combinations. It uses Interpolated Markov Model(IMM) for selecting thebest gene
model. The system has been trained for Arabidopsis thaliana, Oryza sativa
(rice),and Plasmodium falciparum (the malaria parasite), and should work well
on closely related organisms.
Status:
Vendor Tag: daprice
Release Tags: daprice_20050225
N wip/glimmerm/DESCR
N wip/glimmerm/distinfo
N wip/glimmerm/NOTES
N wip/glimmerm/PLIST
N wip/glimmerm/Makefile
N wip/glimmerm/patches/patch-aa
N wip/glimmerm/patches/patch-ab
N wip/glimmerm/patches/patch-ad
N wip/glimmerm/patches/patch-ae
N wip/glimmerm/patches/patch-af
N wip/glimmerm/patches/patch-ac
No conflicts created by this import
To generate a diff of this commit:
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
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