CVS commit: wip/R-bnlearn

["Mike M. Volokhov" <bubuchka%users.sourceforge.net@localhost>]

Module name:    wip
Committed by:   bubuchka
Date:           Fri Nov 16 01:05:42 UTC 2012

Modified Files:
        wip/R-bnlearn: DESCR Makefile distinfo

Log Message:
Update R-bnlearn to version 3.1. Major changes:

* fixed all.equal(), it did not work as expected on networks
  that were idetical save for the order of nodes or arcs.
* added a "moral" argument to cpdag() and vstructs() to make
  those functions follow the different definitions of v-structure.
* added support for graphs with 1 and 2 nodes.
* fixed cpquery() handling of TRUE (this time for real).
* handle more corner cases in dsep().
* added a BIC method for bn and bn.fit objects.
* added the semiparametric tests from Tsamardinos & Borboudakis
  (thanks Maxime Gasse).
* added posterior probabilities to the predictions for
  {naive,tree}.bayes() models.
* fixed buffer overflow in rbn() for discrete data.


To generate a diff of this commit:
cvs -z3 rdiff -u -r1.2 -r1.3 wip/R-bnlearn/DESCR wip/R-bnlearn/distinfo
cvs -z3 rdiff -u -r1.7 -r1.8 wip/R-bnlearn/Makefile

To view a diff of this commit:
http://pkgsrc-wip.cvs.sourceforge.net/pkgsrc-wip/wip/R-bnlearn/DESCR?r1=1.2&r2=1.3
http://pkgsrc-wip.cvs.sourceforge.net/pkgsrc-wip/wip/R-bnlearn/distinfo?r1=1.2&r2=1.3
http://pkgsrc-wip.cvs.sourceforge.net/pkgsrc-wip/wip/R-bnlearn/Makefile?r1=1.7&r2=1.8

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

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