[pkgsrc/trunk]: pkgsrc/biology/ncbi-blast+ biology/ncbi-blast+: document poss...

[rillig <rillig%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/62d3f9a41948
branches:  trunk
changeset: 432712:62d3f9a41948
user:      rillig <rillig%pkgsrc.org@localhost>
date:      Mon May 25 05:19:06 2020 +0000

description:
biology/ncbi-blast+: document possible array[char] bug

diffstat:

 biology/ncbi-blast+/Makefile |  8 +++++++-
 1 files changed, 7 insertions(+), 1 deletions(-)

diffs (22 lines):

diff -r abd5a64f6928 -r 62d3f9a41948 biology/ncbi-blast+/Makefile
--- a/biology/ncbi-blast+/Makefile      Mon May 25 05:18:35 2020 +0000
+++ b/biology/ncbi-blast+/Makefile      Mon May 25 05:19:06 2020 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.15 2020/05/22 10:55:57 adam Exp $
+# $NetBSD: Makefile,v 1.16 2020/05/25 05:19:06 rillig Exp $
 
 DISTNAME=      ncbi-blast-2.8.1+-src
 PKGNAME=       ${DISTNAME:S/+-src//:S/blast/blast+/}
@@ -46,6 +46,12 @@
 CONFIGURE_ENV+=                ac_cv_func_statfs=no
 .endif
 
+# c++/src/objtools/edit/seq_entry_edit.cpp: In member function 'void ncbi::objects::edit::{anonymous}::CSeqdescSortMap::Init()':
+# c++/src/objtools/edit/seq_entry_edit.cpp:172:44: error: array subscript has type 'char' [-Werror=char-subscripts]
+#              while (descr_insert_order[index] != 0)
+# Maybe fix this later.
+BUILDLINK_TRANSFORM+=  rm:-Werror=char-subscripts
+
 post-install:
        ${RM} ${DESTDIR}${PREFIX}/include/ncbi-tools++/*/*/.cvsignore.extra
        ${STRIP} ${DESTDIR}${PREFIX}/lib/ncbi-tools++/*.so