pkgsrc-WIP-changes by thread

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• R-RNetCDF: Remove, in pkgsrc proper, and unfetchab, coypu
• alure: Remove example binaries, bgermann
• alure: Add flac link patch, bgermann
• alure: Correct path, bgermann
• xar: Add reference to CVE-2018-17093 and CVE-2018-, Leonardo Taccari
• trinity-devel: Successful build, generate plist, Jason Bacon
• sacc-git: Import sacc-1.00 as wip/sacc-git, Leonardo Taccari
• 389-ds-base: Add a reference to CVE-2018-14638, Leonardo Taccari
• baresip: update to baresip 0.5.11, Yorick Hardy
• ags: update to ags-3.4.1.15, Yorick Hardy
• Remove ncurses patch that is unnecessary now, bgermann
• Makefile: Sync with reality (via `pkglint -F'), Leonardo Taccari
• py-rt: Remove, imported in pkgsrc as net/py-rt, Leonardo Taccari
• rust-bin: Generate platform-dependent PLIST entrie, Min Sik Kim
• py-rt: Update wip/py-rt to 1.0.11, Leonardo Taccari
• trinity-devel: Test new version before removing ol, Jason Bacon
• gambas3-runtime: Add qt5 option, bgermann
  • <Possible follow-ups>
  • gambas3-runtime: Add qt5 option, bgermann
• gambas3-runtime: Move PLIST_VAR, bgermann
• gambas3-runtime: Add gtk2 and gtk3 options, bgermann
• rust-bin: Fix build on non-Darwin, Min Sik Kim
• gambas3: Update to a new version, bgermann
• trimmomatic: Flexible read trimming tool for Illum, Jason Bacon
• p5-transdecoder: Upgrade to 5.3.0, Jason Bacon
• cdhit: Testing 4.6.8 release, Jason Bacon
• fastool: Clean up, Jason Bacon
• jellyfish2: Upgrade to 2.2.10 and clean up, Jason Bacon
• cpuminer-multi: build on NetBSD and other responsi, Izaac
• bowtie: Fix docs location, Jason Bacon
• bowtie2: Upgrade to 2.3.4.2 and clean up, Jason Bacon
• bowtie: Upgrade to 1.1.2 and clean up, Jason Bacon
• gambas3: Refine xdg-utils usage, bgermann
• salmon: Successful build, Jason Bacon
• tbb: Fix install, add libtbb_proxy, Jason Bacon
• gambas3: Introduce Options, bgermann
• fswebcam: Complete the packaging of fswebcam, Leonardo Taccari
• rust-bin: Add distfiles for more platforms, Min Sik Kim
• rust-bin: Update to 1.29.0, Min Sik Kim
• xf86-video-intel-git: fix build. now this crashes , coypu
• salmon: Add unzip dep, Jason Bacon
• salmon: Fix distfile names, Jason Bacon
• salmon: Transcript-level quantification of RNA-seq, Jason Bacon
• cereal: Add bl3, Jason Bacon
• tbb: Library that provides thread building blocks, Jason Bacon
• openrct2: Import openrct2-0.2.1 as wip/openrct2, Leonardo Taccari
• cereal: C++11 library for serialization, Jason Bacon
• gambas3-gb-qt5: Add package, bgermann
• slclust: Clean up, Jason Bacon
• mk/pear-channel.mk: Remove reference to PEARDIR, Antonio Huete Jimenez
• filter_audio-git: remove, release is in pkgsrc, coypu
• uTox-git: depend on filter_audio release, coypu
• utox-git: disable asan., coypu
• uTox-git: add test target, coypu
• uTox-git: depend on a package that exists. unteste, coypu
• (mail/mu-cite) Updated from 201406091013 to 201808, Makoto Fujiwara
• Adding vsearch as a dependency., Dan Siercks
• navit-git: Update to most recent version, FeZ
• emacs-git: sync PLIST, Thomas Klausner
  • <Possible follow-ups>
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
  • emacs-git: sync PLIST, Thomas Klausner
• syncthing-{discosrv,relaysrv}: 0.14.49 -> 0.14.50, Izaac
• Works for spacefm, NetBSD with known -lX11 problem, andyb
• more linuxsupport, dbus, libmount, hal wrappers ne, andyb
• rust-bin: Import version 1.28.0, Min Sik Kim
• py-python-igraph: Additional fixes., Antonio Huete Jimenez
• Import python-igraph-0.7.1.post6 as wip/py-python-, Antonio Huete Jimenez
• cleanscore: Add a-Suffix to DISTNAME and use WRKSR, Michael Baeuerle
• slrn: Add a-Suffix to package name and use WRKSRC , Michael Baeuerle
• cleanscore: Added to Makefile, Michael Baeuerle
• cleanscore: Use slrn tarball as source, Michael Baeuerle
• slrn: Updated master site, Michael Baeuerle
• slrn: Updated Makefile, Michael Baeuerle
• slrn-devel: Removed from Makefile, Michael Baeuerle
• slrn-devel: Removed, older than news/slrn (OK from, Michael Baeuerle
• Current work is to make the package working for li, root
• crytal-bin: Update to 0.26.1, Min Sik Kim
• Update libvips to 8.6.5, atomicules
• gambas3-scripter: Add icon, bgermann
  • <Possible follow-ups>
  • gambas3-scripter: Add icon, bgermann
• gambas3-gb-opengl-glsl: Add missing glu dependency, bgermann
• gambas3-gb-gtk-opengl: Fix package name, bgermann
• gambas3: Correct DEPENDS, bgermann
• gambas3-gb-ncurses: Add PLIST files, bgermann
• gambas3: Add missing packages (except gambas3-gb-q, bgermann
• efl121: Fix some PKG_DEVELOPER=yes warnings, coypu
• TODO: - rclone-1.43.1, Leonardo Taccari
• rclone: Update wip/rclone to 1.43.1, Leonardo Taccari
• doc/TODO: + rclone-1.43.1., Thomas Klausner
• MesaLib: update to 18.2.0., coypu
• MesaLib-dfbsd: don't depend on removed package, coypu
• sfeed: Remove, imported in pkgsrc as news/sfeed, Leonardo Taccari
• Restore Makefile., nia
  • Re: Restore Makefile., Nia Alarie
• sfeed: Update wip/sfeed to 0.9.6, Leonardo Taccari
• (mail/sendamil) snapshot ver. updated from 8.16.0., Makoto Fujiwara (CF-SX2)
• Works on stable branche enlightenment desktop, andyb
• sfeed: Address more ctype(3) UBs, Leonardo Taccari
• sfeed: Add patches to avoid ctype(3) UB, Leonardo Taccari
• Work on the latest stable enlightenment desktop, andyb
  • Re: Work on the latest stable enlightenment deskto, Leonardo Taccari
• gambas3: pkglint -Wall fixes, bgermann
• gambas3: Some pkglint fixes, bgermann
• gambas3-gb-desktop: Use pkgsrc's xdg-utils over bu, bgermann
• gambas3-gb-opengl: Replace one dep to build, bgermann
• gambas3: Fix minor bugs, bgermann
• gambas3-runtime: build depends on gambas3-gb-qt4-{, bgermann
• 389-ds-base: Add reference to CVE-2018-14624, Leonardo Taccari
• koha: Add references to CVE-2018-1000669 and CVE-2, Leonardo Taccari
• Update gitea to 1.5.1, Antonio Huete Jimenez
• miniircd: Import miniircd-1.2.1 as wip/miniircd, Leonardo Taccari
• sfeed: Import sfeed-0.9.5 as wip/sfeed, Leonardo Taccari
• wip/hplibunwind-git: import hplibunwind-1.1.0nb201, Kamil Rytarowski
• emacs-git: add new files to PLIST, Thomas Klausner
  • <Possible follow-ups>
  • emacs-git: add new files to PLIST, Thomas Klausner
  • emacs-git: add new files to PLIST, Thomas Klausner
  • emacs-git: add new files to PLIST, Thomas Klausner
  • emacs-git: add new files to PLIST, Thomas Klausner
• gambas3-runtime: Add gb.gui.base component, bgermann
• gambas3-gb-eval-highlight: Add dependency, bgermann
• gambas3-gb-ncurses: Link with gnupanel.so, bgermann
• gambas3-gb-ncurses: Add patch to find the ncurses , bgermann
• gambas3-runtime: build depends on gambas3-gb-qt4, bgermann
• tmux: Add references to pull ups and little adjust, Leonardo Taccari
• gambas3: Add more packages, bgermann
  • <Possible follow-ups>
  • gambas3: Add more packages, bgermann
• gambas3: Fix dependencies and a PLIST, bgermann
• Removed py-oauth/py-oauth2 dependencies, Adam Ciarciński
• gambas3: Add many packages (including gambas3-ide), bgermann
• py-gobject3*: partial update to 3.30.0, Thomas Klausner
• mosquitto: Update TODO., Greg Troxel
• mosquitto: rename packages to modern mkpatches-cre, Greg Troxel
• mosquitto: trim no-longer-valid comments from patc, Greg Troxel
• mosquitto: remove config.mk in post-extract, Greg Troxel
• leafnode: Removed from Makefile, Michael Baeuerle
• leafnode: remove, used for updating news/leafnode, Thomas Klausner
• mosquitto: Update TODO, Greg Troxel
• mosquitto: Update to 1.5.1, Greg Troxel
• tmux: Remove patches/patch-server-client.c, Leonardo Taccari
• tmux: Take MAINTAINERship, Leonardo Taccari
• tmux: Address -Wint-conversion warnings, Leonardo Taccari
• mosquitto: Use SUBST_SED to remove non-portable st, Greg Troxel
• mosquitto: Remove ldconfig with SUBST_SED, to redu, Greg Troxel
• mosquitto: Add/adjust comments., Greg Troxel
• mosquitto: Drop SunOS-specific PLIST after transit, Greg Troxel
• tmux: Import tmux-2.8rc as wip/tmux, Leonardo Taccari
• leafnode: Updated README, Michael Baeuerle
• pkglint fix., Hauke Fath
• pacman: bumped PKGREVISION, Aleksej Lebedev
• pacman: fixed installation of conf files., Aleksej Lebedev
• Added pacman, a package manager used by Arch and M, Aleksej Lebedev
• A few gambas3 packages, bgermann
• leafnode: Updated post-1.11.11 patches., Michael Baeuerle
• tin: remove, used for updating news/tin, Thomas Klausner
• dotclear: Add a reference to CVE-2018-16358, Leonardo Taccari
• alure: Remove options.mk from buildlink3.mk, bgermann
• taskd: import in pkgsrc as net/taskserver, Frédéric Fauberteau
• qutebrowser: update to qutebrowser-1.4.2, Yorick Hardy
• dosbox-x: update to dosbox-x-0.82.9, Yorick Hardy
• TODO: Remove rclone (updated to 1.43), Leonardo Taccari
• rclone: Update wip/rclone to 1.43, Leonardo Taccari
• doc/TODO: + rclone-1.43., Thomas Klausner
• go-trie: Import version 0.0.0.20140408, Min Sik Kim
• go-gopacket: Fix PLIST on non-BSD platforms, Min Sik Kim
• go-gopacket: Add a missing PLIST entry on Linux, Min Sik Kim
• free42: Add a 2.0.x wip version, based on pkgsrc/e, Greg Troxel
• go-gopacket: Set LDFLAGS so that cgo can find libp, Min Sik Kim