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fastq-trim: Update to 0.1.0.17
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sat Jan 15 10:12:40 2022 -0600
Changeset: 493cdf2bd7529e2097a306f01c9c899c8e7aad12
Modified Files:
fastq-trim/Makefile
fastq-trim/PLIST
fastq-trim/distinfo
Log Message:
fastq-trim: Update to 0.1.0.17
Install library, headers, and man pages for fastq_trim class
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=493cdf2bd7529e2097a306f01c9c899c8e7aad12
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
fastq-trim/Makefile | 4 +--
fastq-trim/PLIST | 71 +++++++++++++++++++++++++++++++++++++++++++++++++++++
fastq-trim/distinfo | 6 ++---
3 files changed, 76 insertions(+), 5 deletions(-)
diffs:
diff --git a/fastq-trim/Makefile b/fastq-trim/Makefile
index 220453d7f7..c7ab697d08 100644
--- a/fastq-trim/Makefile
+++ b/fastq-trim/Makefile
@@ -5,10 +5,10 @@
# Fri Jan 7 09:05:08 CST 2022 #
###########################################################
-DISTNAME= fastq-trim-0.1.0.14
+DISTNAME= fastq-trim-0.1.0.17
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=outpaddling/}
-GITHUB_TAG= 9d072ff319bb324d9c56557f8dc01dbc1254d4f5
+GITHUB_TAG= a6f68dedb4d9d9f395a2de6eb1a4deb246155d1b
MAINTAINER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/outpaddling/Fastq-trim
diff --git a/fastq-trim/PLIST b/fastq-trim/PLIST
index d02bd0c9f2..c2ceb988b1 100644
--- a/fastq-trim/PLIST
+++ b/fastq-trim/PLIST
@@ -1,5 +1,76 @@
@comment $NetBSD$
bin/fastq-trim
bin/fastq-vis
+include/fastq-trim-accessors.h
+include/fastq-trim-mutators.h
+include/fastq-trim-rvs.h
+include/fastq-trim.h
+lib/libfastq-trim.a
man/man1/fastq-trim.1
man/man1/fastq-vis.1
+man/man3/FASTQ_TRIM_ADAPTER1.3
+man/man3/FASTQ_TRIM_ADAPTER1_AE.3
+man/man3/FASTQ_TRIM_ADAPTER2.3
+man/man3/FASTQ_TRIM_ADAPTER2_AE.3
+man/man3/FASTQ_TRIM_ADAPTER_MATCH_FUNCTION.3
+man/man3/FASTQ_TRIM_INFILE1.3
+man/man3/FASTQ_TRIM_INFILE1_AE.3
+man/man3/FASTQ_TRIM_INFILE2.3
+man/man3/FASTQ_TRIM_INFILE2_AE.3
+man/man3/FASTQ_TRIM_INSTREAM1.3
+man/man3/FASTQ_TRIM_INSTREAM1_AE.3
+man/man3/FASTQ_TRIM_INSTREAM2.3
+man/man3/FASTQ_TRIM_INSTREAM2_AE.3
+man/man3/FASTQ_TRIM_MAX_MISMATCH_PERCENT.3
+man/man3/FASTQ_TRIM_MIN_LENGTH.3
+man/man3/FASTQ_TRIM_MIN_MATCH.3
+man/man3/FASTQ_TRIM_MIN_QUAL.3
+man/man3/FASTQ_TRIM_OUTFILE1.3
+man/man3/FASTQ_TRIM_OUTFILE1_AE.3
+man/man3/FASTQ_TRIM_OUTFILE2.3
+man/man3/FASTQ_TRIM_OUTFILE2_AE.3
+man/man3/FASTQ_TRIM_OUTSTREAM1.3
+man/man3/FASTQ_TRIM_OUTSTREAM1_AE.3
+man/man3/FASTQ_TRIM_OUTSTREAM2.3
+man/man3/FASTQ_TRIM_OUTSTREAM2_AE.3
+man/man3/FASTQ_TRIM_PHRED_BASE.3
+man/man3/FASTQ_TRIM_POLYA_MIN_LEN.3
+man/man3/FASTQ_TRIM_VERBOSE.3
+man/man3/fastq_trim_set_adapter1.3
+man/man3/fastq_trim_set_adapter1_ae.3
+man/man3/fastq_trim_set_adapter1_cpy.3
+man/man3/fastq_trim_set_adapter2.3
+man/man3/fastq_trim_set_adapter2_ae.3
+man/man3/fastq_trim_set_adapter2_cpy.3
+man/man3/fastq_trim_set_adapter_match_function.3
+man/man3/fastq_trim_set_infile1.3
+man/man3/fastq_trim_set_infile1_ae.3
+man/man3/fastq_trim_set_infile1_cpy.3
+man/man3/fastq_trim_set_infile2.3
+man/man3/fastq_trim_set_infile2_ae.3
+man/man3/fastq_trim_set_infile2_cpy.3
+man/man3/fastq_trim_set_instream1.3
+man/man3/fastq_trim_set_instream1_ae.3
+man/man3/fastq_trim_set_instream1_cpy.3
+man/man3/fastq_trim_set_instream2.3
+man/man3/fastq_trim_set_instream2_ae.3
+man/man3/fastq_trim_set_instream2_cpy.3
+man/man3/fastq_trim_set_max_mismatch_percent.3
+man/man3/fastq_trim_set_min_length.3
+man/man3/fastq_trim_set_min_match.3
+man/man3/fastq_trim_set_min_qual.3
+man/man3/fastq_trim_set_outfile1.3
+man/man3/fastq_trim_set_outfile1_ae.3
+man/man3/fastq_trim_set_outfile1_cpy.3
+man/man3/fastq_trim_set_outfile2.3
+man/man3/fastq_trim_set_outfile2_ae.3
+man/man3/fastq_trim_set_outfile2_cpy.3
+man/man3/fastq_trim_set_outstream1.3
+man/man3/fastq_trim_set_outstream1_ae.3
+man/man3/fastq_trim_set_outstream1_cpy.3
+man/man3/fastq_trim_set_outstream2.3
+man/man3/fastq_trim_set_outstream2_ae.3
+man/man3/fastq_trim_set_outstream2_cpy.3
+man/man3/fastq_trim_set_phred_base.3
+man/man3/fastq_trim_set_polya_min_len.3
+man/man3/fastq_trim_set_verbose.3
diff --git a/fastq-trim/distinfo b/fastq-trim/distinfo
index 04a7928bf5..f019296aef 100644
--- a/fastq-trim/distinfo
+++ b/fastq-trim/distinfo
@@ -1,5 +1,5 @@
$NetBSD$
-BLAKE2s (fastq-trim-0.1.0.14-9d072ff319bb324d9c56557f8dc01dbc1254d4f5.tar.gz) = 643c4811c29fc6823e860ef909273bb8c51f2e492c0673f2b3a7143d76ff4f1f
-SHA512 (fastq-trim-0.1.0.14-9d072ff319bb324d9c56557f8dc01dbc1254d4f5.tar.gz) = 1106b2db736ad6e7147e4d719d3f637c2b1bbdf30a71ce4e620afa003ce137a43c330116566d90d27b7a4a8e36def083b860efd2c9da41e7671f0e2326d46a7c
-Size (fastq-trim-0.1.0.14-9d072ff319bb324d9c56557f8dc01dbc1254d4f5.tar.gz) = 21122 bytes
+BLAKE2s (fastq-trim-0.1.0.17-a6f68dedb4d9d9f395a2de6eb1a4deb246155d1b.tar.gz) = 0922f704e19d175d9198cacfd9788c554e7c8b441227c687730227199b6a00ae
+SHA512 (fastq-trim-0.1.0.17-a6f68dedb4d9d9f395a2de6eb1a4deb246155d1b.tar.gz) = 6a1c20a6392ce369a5e549ad03d276b7eaa735703bb17befd07f774f8eefb8cfbf35996b884d1cc9b4fd69520e49143a2c137eb1c2ff87316d735b3bb39f374a
+Size (fastq-trim-0.1.0.17-a6f68dedb4d9d9f395a2de6eb1a4deb246155d1b.tar.gz) = 28522 bytes
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