bcftools: Bring Makefile in line with htslib and samtools

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Sat Feb 25 07:28:00 2023 -0600
Changeset:	87c182ff1aff45effcb4c7f25184f47a144445b5

Modified Files:
	bcftools/Makefile
	bcftools/distinfo

Log Message:
bcftools: Bring Makefile in line with htslib and samtools

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=87c182ff1aff45effcb4c7f25184f47a144445b5

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 bcftools/Makefile | 13 +++++++------
 bcftools/distinfo |  6 +++---
 2 files changed, 10 insertions(+), 9 deletions(-)

diffs:
diff --git a/bcftools/Makefile b/bcftools/Makefile
index 9411c1ce16..21979247ed 100644
--- a/bcftools/Makefile
+++ b/bcftools/Makefile
@@ -3,14 +3,19 @@
 DISTNAME=	bcftools-1.17
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=samtools/}
+GITHUB_RELEASE=	${PKGVERSION_NOREV}
+EXTRACT_SUFX=	.tar.bz2
 
 OWNER=		bacon%NetBSD.org@localhost
 HOMEPAGE=	https://www.htslib.org/
 COMMENT=	Tools for manipulating BCF and VCF variant call files
 LICENSE=	mit
 
-USE_TOOLS+=	autoconf automake autoreconf bash gmake perl
-GNU_CONFIGURE=	yes
+USE_TOOLS+=		autoconf automake autoreconf bash gmake perl
+GNU_CONFIGURE=		yes
+CONFIGURE_ARGS+=	--with-htslib=system
+MAKE_ENV+=		USE_GPL=1
+TEST_TARGET=		test
 
 SUBST_CLASSES+=		version
 SUBST_STAGE.version=	pre-configure
@@ -29,10 +34,6 @@ REPLACE_PERL+=		misc/plot-vcfstats
 REPLACE_PERL+=		test/test.pl
 REPLACE_PYTHON+=	misc/*.py
 
-CONFIGURE_ARGS+=	--with-htslib=system
-MAKE_ENV+=		USE_GPL=1
-TEST_TARGET=		test
-
 pre-configure:
 	cd ${WRKSRC} && autoreconf -if
 
diff --git a/bcftools/distinfo b/bcftools/distinfo
index 915d98f203..1acb1cf2fb 100644
--- a/bcftools/distinfo
+++ b/bcftools/distinfo
@@ -1,6 +1,6 @@
 $NetBSD$
 
-BLAKE2s (bcftools-1.17.tar.gz) = c4d7de62bcde7814acc5921ace355e2d81e39a680edb2b3384ac7b0b6912a73b
-SHA512 (bcftools-1.17.tar.gz) = aec159cf257f2400ac21b68029fc98a5b1bd3e74b975acd660fdea79476eb5f07592db899ecb2d6ce056ae205fd0abac8105b9b9f0863fc6e96e87fd57115968
-Size (bcftools-1.17.tar.gz) = 3481344 bytes
+BLAKE2s (bcftools-1.17.tar.bz2) = 322846c2569abe78d079cadf82e6cb629c064e26161d5a08cdbfc7c45215a6f0
+SHA512 (bcftools-1.17.tar.bz2) = 39ae44a682e626a5261900e9412170a269e460b559d6607db697e6a12b1e512ffb3bdeb3486413e19b8adca26a8ccbb2bd4af24459decb74592c54473d2c6a68
+Size (bcftools-1.17.tar.bz2) = 7538043 bytes
 SHA1 (patch-Makefile) = 9dfe7b5dcf77deac6d248d7612440780ec8a3731